SimpleSearch - Line and FST details


Line specific information

 
Line ID 727F11
Vector Used pGABI1
Line Availability available as T3 set from NASC (N469767)
Segregation Analysis 50:49:48
Confirmed for Hit At1g19700
Parent of DUPLO pair 2443
Parent of pair(s) none

Gene hit At1g19700

 
Sequence (A. th genome BLAST matches underlined) 
>86-K025112-022-727-F11-8409
GAAACTTTAGTGATAGAGCTGTTTTACGACTACCTATCCCTACTAAGGGATTTCTTATAT
GCATCGCACATGAGCGAAACCCTATAGGAACCCTAATTCCCTTATCTGGGAACTGCTCAC
ACATTATTATGGAGAGAGATAGATTTGTAGAGAGAGACTGGTGATTTCAGCGGGCATGCC
TGTATGGGATCCTACTCATCGTGTGAGCCGCAGCAACAGCAAGAAAACAACAACAGCTGC
CGCCTCGCTTATTCGTCTGCAGACGCACCAAACGTTGTCTTCTCATCAGAAACCAAACCC
GATCGTGTTCGAGGCGATGATAACGACCCACAGCAGCAACAGATAAACCGCTCATCGGAT
TACGACGCTCTGATGAACTATCACGGGGTTGGTGTTGATGATTACCGTTACATTAGCGGA
AGCAACCAGCAAGAAAGCAGATTCTCCTATTCCCATCACTTACACGACTTTGTTGTGTGA
TATTATCTGGTTCTTCTTGGTGTGGGATCCCCCCTATAGTGGGGATGTTTTGATAAGA
GenBank Accession BX945588 [GenBank]
Graphic View Graphic view of gene At1g19700
Predicted Position of Insertion Chr1:6810406 - go to primer design
BLAST e Value 1e-123
Hit Clone Code (BAC ID) F14P1
Hit Gene Code At1g19700 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation BEL1-like homeodomain 10
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit T1O13

 
Sequence (A. th genome BLAST matches underlined) 
>86-K025221-022-727-F11-8409
TTACATTGAATAATCCTGACAATGGTTAAATATCATCATAACATGATTAGATTAAATATC
ACTAGTAATAATATAATAACATGACAAAAAAAGAATGCAGACAATAAACTTTTGAAATGC
ATAAATATAATATTTCAATACTAAAGCAGAGTAATTCAAGAGACCATTTTAACAACAAAT
AATACTTCAGCAATACAAAATGATTCCAATAAAAACAGAGCATTAGAGTATGGGATCCTC
CCTATAGTGAG
GenBank Accession CR358467 [GenBank]
Graphic View Graphic view of sequence CR358467 of line 727F11
Predicted Position of Insertion Chr3:12866842 - go to primer design
BLAST e Value 3e-99
Hit Clone Code (BAC ID) T1O13
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37