SimpleSearch - Line and FST details
Line specific information
| Line ID | 729B04 |
| Vector Used | pGABI1 |
| Line Availability | available as T3 set from NASC (N469904) |
| Segregation Analysis | 50:50:48 |
| Confirmed for Hit | At1g53320 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 5244, 95524 |
Gene hit At1g53320
| Sequence (A. th genome BLAST matches underlined) | >26-K025114-022-729-B04-8409 CCTTTACATTGAATAATCCTTTCGCGGAGGATCTCGAACTCTTTTAGGTTTCATCAGGGA GAGACAACGACGGCACCGGAATCCGAATCGATTCCTCCGCCGTCGAATATGGCCGGTTCT TCGTCATGGTCGGCGATGCTCCCTGAATTATTAGGCGAGATCATTCGTCGCGTGGAGGAG ACTGAGGACCGTTGGCCTCAACGTCGTGATGTAGTTACTTGCGCTTGCGTTTCTAAGAAA TGGAGAGAAATCACTCACGATTTCGCTAGATCCTCTCTTAACTCTGGCAAAATTACTTTC CCTTCTTGCCTCAAATTGGTATGGGATCCTCCCTATAGTGAGAGAGATTCANAGGTTTCT TCGTATTGATAACTTGGTTGAGTCTGAGGAACCTCGAATTGCTTATCTATGTGAGTTCAC TCTCTCCTCTTCCCTAATTTTGTAGGTCAATATTTCACTGAGTTTTTCTTCGAAATTCAA GCTTTCTTGTTGAAGAATCATACTTGGGTATGGGATCCTCCCTATAGTGAGGNNNNNNNN NN |
| GenBank Accession | BX945671 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:19893410 - go to primer design |
| BLAST e Value | 5e-172 |
| Hit Clone Code (BAC ID) | F12M16 |
| Hit Gene Code | At1g53320 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | tubby like protein 7 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At3g14570
| Sequence (A. th genome BLAST matches underlined) | >26-K025222-022-729-B04-8409 TTTCCTCCTTATAAAGATCCTTCCTTCTCCATCCTCTCTTCCCTCCTTCCGATGCTTCCC TCCAAAACCCCACCGACGACCTAATCCCTAAAACACGAATCAGCTTAATTCGTCTGATTC TGATTGATTTTCTCCCAAAACATGTCTCACGAAATCGTCCCCGTTGATCCCATTGATGTT CCTAGCACGAGTTACTCACGGCCAATTCTGGGTCCTCGTGAAGATTCGCCGGAACGTGCT ACCGAGTTCACGAGATCCCTAACTTTTCGGGAACATGTGTCGTCGGAGCCTTTTGATAGC GAGAGGCTTCCAGCGACATTAGCTTCCGAGATTCAGAGGTTTCTTCGTATTGCTAACTTG GTTGAGTCTGAGGAACCTCGAATTGCTTATCTATGTGAGTTCACTCTCTCCTCTTCCCTA ATTTTGTAGGTCAATATTTCACTGAGTTTTTCTTCGAAATTCAAGCTTTCTTGTTGAAGA ATCATACTTGAGTATGGGATC |
| GenBank Accession | CR358560 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:4892521 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | MIE1 |
| Hit Gene Code | At3g14570 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | glucan synthase-like 4 |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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