SimpleSearch - Line and FST details


Line specific information

 
Line ID 733D11
Vector Used pGABI1
Line Availability available as T3 set from NASC (N470319)
Segregation Analysis 50:43:24
Confirmed for Hit At1g53840
Parent of DUPLO pair none
Parent of pair(s) 3268, 3286

Gene hit At1g53840

 
Sequence (A. th genome BLAST matches underlined) 
>84-K025420-022-733-D11-8409
GNAGCCATTTACAATTGAATATTTCCTCCACTTTGCTCGAGCTTTGGAAAGATGTTACTG
ATTCCAGTAATTCCTCCCTAAACAGAGCCTCCTTTTTTTCTGGTTTTTGGGATGATTACT
AATATTGTTTGAGGCTTTGTTATGTTCTGTTGTTTATGTTAGAGAAGACATGTTGTTGTT
TGCCTTTTTAAGTGGGATTAAGTAATTGTGAATGATGAACGTGACGCCCTTGTTCCACGG
TGACTTCTTGTCGTCTAAGTGTGTGTGTGATATCCTGTCTTTGAACAGCAATACCCGTTT
GCTTTATCGTCAATACCTTTTTCGGGATGGCATCCTCCCTATGGGGAGGGAGACTTATAT
TGTTTCTGTAATACGTTCATATTAGACATATCTCTTTGTAGGTTTATATTACGTTAACTG
TGGGAATAATTAAAGCATTCATTTTTCTACTATTACCTGACT
GenBank Accession CR359088 [GenBank]
Graphic View Graphic view of gene At1g53840
Predicted Position of Insertion Chr1:20101565 - go to primer design
BLAST e Value 1e-76
Hit Clone Code (BAC ID) T18A20
Hit Gene Code At1g53840 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation pectin methylesterase 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR359088 [GenBank]


Last Updated on 10.06.2021 13:37