SimpleSearch - Line and FST details


Line specific information

 
Line ID 735E12
Vector Used pGABI1
Line Availability available as T3 set from NASC (N470524)
Segregation Analysis 50:48:37
Confirmed for Hit At3g50220
Parent of DUPLO pair none
Parent of pair(s) 8104, 95490

Gene hit At3g50220

 
Sequence (A. th genome BLAST matches underlined) 
>93-K025475-022-735-E12-8409
TGGGATCCGTCCCTATAGTGAGACGTATTAGTCCCCCCAAAAGGGGACCTGTTTTATTGT
TACGCCTGAATCTTTATGCATCGACTAAATGGTCTAGAGGGAACTTATATACTAAGAAAT
TCTGTTATACCATATGAGGACATTTTCCCTTTTTGAATCACTTTAACATAGTATCTTTAT
GAAAAATTGTGGACTTCTTTCTATGGAAGCCTCCCTATAATGCGCCGTATAACGAGCACA
ATCGTTACTACGCGGCTTACTTCGAAGAAATCCACCCGGAGATCGACGTTTTCGACGTTC
AATACACGACAAAAGCTCACGAAGCTGGAGAGCTCGTCACCGCGGCTAAAGAAGCCGCGG
GAAACGAGTGTCGTCCTGTGCAAAATCTTCTCTTCTCAGATTGTAAATTAGGTCTCAATG
ATTTGCCTAATCATGTCTACGATGTTGATTGGGATGTAATCTTTGTGGACGGGCCACGTG
GCGATGCTCACGA
GenBank Accession CR359385 [GenBank]
Graphic View Graphic view of gene At3g50220
Predicted Position of Insertion Chr3:18618406 - go to primer design
BLAST e Value 1e-141
Hit Clone Code (BAC ID) F11C1
Hit Gene Code At3g50220 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation IRREGULAR XYLEM protein (DUF579)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR359385 [GenBank]


Last Updated on 10.06.2021 13:37