SimpleSearch - Line and FST details


Line specific information

 
Line ID 736G01
Vector Used pGABI1
Line Availability available as T3 set from NASC (N470633)
Segregation Analysis 50:49:39
Confirmed for Hit At5g50130
Parent of DUPLO pair none
Parent of pair(s) 94774, 94778, 94781, 94783, 94785

Gene hit At5g50130

 
Sequence (A. th genome BLAST matches underlined)
>07-K023555-022-736-G01-8409
AAAGTGACCTCCCTTTACTCGCTCTTTATGATTGCAAAGAAAAACAAGAAGGCTGCTTTT
ACAGACATCAATTGTCAAAAACCAATTCCACTACCCAATTGTAGTGAAATAATCTGGTTA
ATTATGATTTCAGTTATGCTGGATCTGAATTTAACTGTGGACTCTTTTTTATTTTTTCCA
TATACACACATAATTTGGAGAAAATACTTAATAACAAATAAGTTTCACTTTTGTTAAATA
CACTTGCTAAAATTATTTTTATCTAAGAAAGTCCAAAAGCACCATTTCAAAATTAGCTGA
TACGAAGTGAAATGGTTCATGTTTTTTAAATACTAGATTGTATTTTTTTATGAAATGTTT
GATGCATACTACTTTCAAACAGGAAGACCGTCTGGGACCGGTGCGAAAACTGCCAAATTG
TTAACAAAAAAAGGGGTGAAAATTACTGATGTCATTTAGAAATATGAACAAAGCACACAT
GGTGCATGGAAAAAATTTAAAGAGAAGAATCCCCGAACCTGACATTTTATTTATTCAAAA
ATTGACCGAACTCACCATTCTTCCCGTTGCTCAAATTCTGCATCACCAAATTCCTTTTCC
CAAAAACTTCCCTCCCAAAAATACACAAGTAAGGAGACCCCCCCCAAAAGAAAAGAAACC
ACAAGAATCAAAAACATACAAATATTATCTCTACACCAGACAACATAAATATTTCCTCCA
CTAACTCAACTTACACCCTAGCTTATAAAAATATCCTTACTAGTCGCAATACTTGATCAA
CCACAAGTCTACCAAAACTTATAAAAAACCAATCACCAAAAAAGACACAGTGATACCAAA
GTAACGACACAACTCCATAAAAATTTGAAAAAACTATTAATAGATATTTCATTATAAAAT
AAGAGAACTCAACACCCTANNTNCGATTATATAAGATCATACAAATAGACNCCAAAAGAG
NGATGTACAAACCCATAATCAAACTAAAAGGCAAAAA
GenBank Accession BX895018 [GenBank]
Graphic View Graphic view of gene At5g50130
Predicted Position of Insertion Chr5:20391047 - go to primer design
BLAST e Value 2e-164
Hit Clone Code (BAC ID) MPF21
Hit Gene Code At5g50130 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation NAD(P)-binding Rossmann-fold superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX895018 [GenBank]


Last Updated on 10.06.2021 13:37