SimpleSearch - Line and FST details


Line specific information

 
Line ID 742B08
Vector Used pAC161
Line Availability available as T3 set from NASC (N471156)
Segregation Analysis 50:46:45
Confirmed for Hit At5g18500
Parent of DUPLO pair none
Parent of pair(s) 5000, 5004, 5041, 5058, 77180, 77189, 77190, 77191, 77192

Gene hit At5g18500

 
Sequence (A. th genome BLAST matches underlined) 
>58-K023519-022-742-B08-8409
ACATGAACCATTTACAATTGAATATATCCTGACGTGAAAGTTTCCATAGAGCGCCATTGA
CGATGATATTATTCCTTGAAAACTGAGTATTATCCATCTGAAGAGATCTTCCAGAGAACC
AGTGACCCCCTCCCAGGTGAGAAAACTCAGGAAGACCAGACAAAGGAGATGGAGCTGTCA
AAGGATTATCAGAACATACGCTCGATCCGGCGGGTTTCTCCAAGTGATTAAACGAGCCTT
GACCGGCTACTATCGCCATTTTCTGACTCTGCTTTTATCCCTTTTTCGGCCTCTTTATCC
CCCCATTCCACTCTCAAAATCCGGATATTCCATACCCCCCATTGCTAGACACAACACTCA
ATCAACTCTTCACCTCAAAACTAACTCTCAACACCCCTAGACACACTCCACTAACAGTCC
TACCTCTATCCTGCGGAGGCACAATACCATCTCTAACTCACCTCCCCCAAGCAAAATCAG
ATCAAGATCA
GenBank Accession BX895449 [GenBank]
Graphic View Graphic view of gene At5g18500
Predicted Position of Insertion Chr5:6139803 - go to primer design
BLAST e Value 2e-75
Hit Clone Code (BAC ID) F20L16
Hit Gene Code At5g18500 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Protein kinase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX895449 [GenBank]


Last Updated on 10.06.2021 13:37