SimpleSearch - Line and FST details


Line specific information

 
Line ID 745D06
Vector Used pAC161
Line Availability available as T3 set from NASC (N471466)
Segregation Analysis 50:38:36
Confirmed for Hit At5g55470
Parent of DUPLO pair none
Parent of pair(s) 3625, 3658, 3783

Gene hit At5g55470

 
Sequence (A. th genome BLAST matches underlined) 
>44-K023867-022-745-D06-8409
AGCCATTTACAATTGAATATATCCTGGAAATCCAACAAGAAAGCATTCACTCTCGCAAAC
TGATAAGTAATAACCATCTCCACAAGAAATGAAAAGAAACATAGATCAGTGAAAAATCTT
ACCAAGATAGTCTCTATGGGATCCTCCCTATAGTGAGTCCTATTACTCCCCGCTTTCTTC
CTCTTTTTTTCCCTCCCCCCCTTCCCCCTCTTGGGGGGTTCTCTTCTTTTNNTTTCCCCT
CTCCTCCCTTCCCTTCTTTCTCCTCCCCTCCCCCTTTTTTTCTCTTCCTTCCTTTCTTCC
TTTTTTCTTCCTTTTTTCTCTTCTCTCTTCCCNCTCCTCCTCCCCCCCTCCCCCCCCCCT
CTTTCCCTTTTTCTTCTCCCTTCCTCCCTCTCCCTTCCCCCCCCCCCAGATACGGATTTC
CTCTTCAGAGTGGTCCGAGATTATGCCACAATATACACTCATATCCCTAAAGTACTGACC
GTTTCAGCCTCCCTTTCCGTGGAGCCC
GenBank Accession BX895648 [GenBank]
Graphic View Graphic view of gene At5g55470
Predicted Position of Insertion Chr5:22471740 - go to primer design
BLAST e Value 4e-49
Hit Clone Code (BAC ID) MTE17
Hit Gene Code At5g55470 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Na /H (sodium hydrogen) exchanger 3
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37