SimpleSearch - Line and FST details


Line specific information

 
Line ID 746A06
Vector Used pAC161
Line Availability available as T3 set from NASC (N471526)
Segregation Analysis 50:41:34
Confirmed for Hit At1g66760
Parent of DUPLO pair none
Parent of pair(s) 8800, 11016, 11022, 11390, 91599, 91614, 91634, 91651, 91666, 91672, 91684, 91689, 91690, 91691, 91692

Gene hit At1g66760

 
Sequence (A. th genome BLAST matches underlined) 
>41-K023942-022-746-A06-8409
GAAATATTTGACCGCGCAACTCGCCTTTTTCCGTTTCCAATCCATCCTTCCATTTTTCCA
GAAATCCAGCCAATATTTGTTTACCCCTTTTTTCCTCCATGAAATTTTGCCGGCAATTAA
GGCTATGGGATCCCCCCTATAGTGAGANNNNNNNNNNNCNCNNNNNCCCCNNNCCCCCCC
CCCCNGGGGGGGGGGGGGGGCCGGGGNGNNCNNGGNCCCCCCCCCGCCGCGGGGCCCCCG
GGCCCGGGGCCGCCGGGCCCCGCCGGGCCCGGGGGCCCGCGCCCCCCCCCCCCCCCGCGG
CCCCGGGGCCCCGGCCCGCCCCCGCCCCCCCCTCGCCGCCCCTCAAGAAATCTGGCAGGC
AATAAGGGCCAGGGGATCCCCCCCAAAACAAGAGACCCAGGGAACCCCCAGATGGGGCGG
AGATTAGGCCAAAAAATACACTCACAAACATAAACACGGACAGTTTGAGCCACCAATTCC
GTGGAGCCCA
GenBank Accession BX895722 [GenBank]
Graphic View Graphic view of gene At1g66760
Predicted Position of Insertion Chr1:24904046 - go to primer design
BLAST e Value 3e-25
Hit Clone Code (BAC ID) F4N21
Hit Gene Code At1g66760 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation MATE efflux family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX895722 [GenBank]


Last Updated on 10.06.2021 13:37