SimpleSearch - Line and FST details


Line specific information

 
Line ID 752B08
Vector Used pAC161
Line Availability available as T3 set from NASC (N472116)
Segregation Analysis 50:48:28
Confirmed for Hit At1g45201
Parent of DUPLO pair none
Parent of pair(s) 68773, 97240, 97241

Gene hit At1g33090

 
Sequence (A. th genome BLAST matches underlined) 
>58-K023799-022-752-B08-8409
ATTCTTGTTTATTTACCAGATTCCTATGGGATCCTCCCTATAGTGAGACGTATTACTCCT
GGAGTTGAGCATACTAGGATACCAGTTGACCATAACTCCAAGCTGTAAAAAATAACGACC
ACCCAGTAATAATCATAAATTAAAAAAAGTAAAGTAAATTAACAAGAAAAAATCAAACAT
ATAACAAAAGAAAAGTAGCATGAATTATAATAAAATATTCAGTGTATAATATATATGCGT
AACTGTAACGGTCGGATCATATTCTCAGTGTAAAAGTATCCCCAGTTGACAGAGGATCCA
CGGGATACCCCCAAAATGGGCAGAGATTAAGCGAAAATATTGACTCATAAACCTAAATAC
TGACAGTTTGAGCTGCCAATTGCGGTGAAGACCATTTGGCCGAAGACCCCAAGGACACGC
GGGACACAACAAGGTAGCGCACGAGAGAGAAATTTGAAGAACAGTGACACGCTGAAGAAC
AGCATAATTGGCAGCTATGATAAGAAGGAAGAGTTCTCATAGGCAAAAATGCAACCAACA
TATGCAAGG
GenBank Accession BX896032 [GenBank]
Graphic View Graphic view of gene At1g33090
Predicted Position of Insertion Chr1:11995331 - go to primer design
BLAST e Value 1e-36
Hit Clone Code (BAC ID) F9L11
Hit Gene Code At1g33090 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation MATE efflux family protein
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At1g45201

 
Sequence (A. th genome BLAST matches underlined) 
>58-K023800-022-752-B08-8409
TATTTCAGCACATGAAGCATTGTACATTGCAATATATCATTAGCGGACGAGTTAAGATTA
TCTATCTTTTTAGCGTTAGCGGTTTAAGAGTTAATTTACTTTGTATGGCTTTTAAAAATA
TGGACCATGTTATTAGTTTTATAGAAAATATTGCCTGGTTTTTTGAAGAGTCTAAAACAA
AGTACAATTAAAACTCAAAATAAATAGGTTATTTATTATCTTTTATATCATCGACATTTC
TCTAAAAAACAAAGGAAAAATTGAAAGTTTCTTCATGTCCACTTTAAATATTCACCCTCT
TTATTCTTTGTCTTTTTTTTTTTAAAAAACCCCTTTATTCTTTTCCTTTTTAAAAAAAAA
AAACAAAAAAAAACCCCCAAAATTAAAAAAAGGCCAATTTAAGGGCCCTTTCCTTTTAAA
AAACTGTTAAAGAAATTGCAAGGCCCAAAAAGGTTGGAAAAAAAAAACTTCTTGACCCCA
AAGGGCCCCCCAAGAAAACCCC
GenBank Accession CR770475 [GenBank]
Graphic View Graphic view of gene At1g45201
Predicted Position of Insertion Chr1:17127848 - go to primer design
BLAST e Value 2e-122
Hit Clone Code (BAC ID) T2P3
Hit Gene Code At1g45201 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation triacylglycerol lipase-like 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37