SimpleSearch - Line and FST details


Line specific information

 
Line ID 752H11
Vector Used pAC161
Line Availability available as T3 set from NASC (N472191)
Segregation Analysis 50:46:46
Confirmed for Hit At1g32510
Parent of DUPLO pair none
Parent of pair(s) 96039

Gene hit F28L22

 
Sequence (A. th genome BLAST matches underlined) 
>88-K023800-022-752-H11-8409
AGCCATTTACAATTGAATATATGGCTATCAACAATAACCATTTGTAGAAGCGTCCATGGT
TATCCTCCCTATAGTGAGATTAAACTTACACATATTATAGATAGCAACATTAAGACCAAT
CAAATCAAGTATAGTACTAATTGTTTTTAAAAGAAGTGACCTTTGTACAATCACCAAACC
AACTCTTGATAGCTCTTGCACAATTACCAAACCAACTCTTGATAGCTCTTGCAGCTTCAA
ACATCCCTTCCAATGCTTTCAAAGTGATCTATGGGATCCTCCCTATAGTGAGACNTATTA
NTCNNNNNNTTNNNNNNNNTTNNGGATACCTTGTTCTCCTTCTTATTGGTCTGAGATTAT
GCGAAAATATACACTCATATACATAAATACTGACAGTTTGAGCTACCAATTCAGTGTAGC
CCATTGGGGGAAGAA
GenBank Accession BX896126 [GenBank]
Graphic View Graphic view of sequence BX896126 of line 752H11
Predicted Position of Insertion Chr1:14112563 - go to primer design
BLAST e Value 2e-100
Hit Clone Code (BAC ID) F28L22
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At1g32510

 
Sequence (A. th genome BLAST matches underlined) 
>88-K023799-022-752-H11-8409
ACATGAGCCATTTACAATTGAATATATGCCTATCCAGATAAGCAATGGGTTGACCTCCGA
CTGCCCCAGCGAGACTATGAGAACGCATCTCAAATAAGTTGAACTACTATTTCTGGTTAT
TGGAAAGCCACTGGACCAGATCCAAAAATCCCTTGCCAGTCTTCCTCATCCTCCTCATCT
TCCTCTATCAGCGGCTGCCGAAAAACCCTATGGGATCCTCCCTATAGTGAGACTGATTAC
CCGATGTCCAAACCAGTATTCTGAAAATACTTGAGGCGACCCATGAAACGTCTGTAATCT
TTACCATCCACTAAGTCACCACCTGAATGACCACAGAAAGTGACAGATGCCCAGTTTCAC
CTTCCTATTGGACCCACCCTATACTAAAAAATACATTCTTTTAGGCAAATACTGACAGTT
TGAGCTACCGGGCTCGGAGAACCCCACTAAGATATACTACCCGCGCATACCCCCCACAAC
CACGACACCCGTTTCATCTCCAGATTGGTCTGAGATTATGCGAAAATATACCCTCATATA
CATAAATACTGACAG
GenBank Accession BX896125 [GenBank]
Graphic View Graphic view of gene At1g32510
Predicted Position of Insertion Chr1:11757259 - go to primer design
BLAST e Value 2e-20
Hit Clone Code (BAC ID) F5D14
Hit Gene Code At1g32510 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation NAC domain containing protein 11
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37