SimpleSearch - Line and FST details


Line specific information

 
Line ID 755E11
Vector Used pAC161
Line Availability available as T3 set from NASC (N472443)
Segregation Analysis 50:48:38
Confirmed for Hit At3g61400
Parent of DUPLO pair none
Parent of pair(s) 7548, 7553, 8652, 8658, 9290, 95802, 95812, 95813, 95814, 95815, 95816, 95817, 95818, 95819, 95820

Gene hit At5g66590

 
Sequence (A. th genome BLAST matches underlined) 
>85-K023550-022-755-E11-8409
ATCATCTTCGTGGTACTTCTTGACATCTCCGTCTCATCCACTCTCACCGGCGGCGAAACT
GAAACCCAAACAAATCGTTTCCACTTCTCCTCCACCTCCTCCAACAATCTCTGCAGCAGC
TAAAGCTTTCACCGATGCGCACAACAAGGCCAGAGCCATGGTTGGTGTTCCACCACTATG
GGATCCTCCCAATATTGAGTCTGCTGATATTCAGATGACCGCATATGAAAAAATATAGCA
TATATGAAAGAAAATTAAAAAATATAATTGAAAAATATGCAAAAAAAAGAATATACGAAA
GAGCAAAAAACACCAGGAAACTATATAATGAAAACACTAAATACAGAAAAATACTGACAA
ACAAAAGAAAACAGAAAAAAAAAAAATTGGGATGAATCACGAATTACTAGTAAAGAAACT
AAAAGAAGAGTAACAAAAGCTCCTCACCAACAACAAAAAGCAAAAAATAACAATTAGTAA
AAGAACAATACATTACAA
GenBank Accession BX896376 [GenBank]
Graphic View Graphic view of gene At5g66590
Predicted Position of Insertion Chr5:26574255 - go to primer design
BLAST e Value 1e-79
Hit Clone Code (BAC ID) K1F13
Hit Gene Code At5g66590 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At3g61400

 
Sequence (A. th genome BLAST matches underlined) 
>85-K023563-022-755-E11-8409
GAAGCCATTTACAATTGAATACATGCAGACTATCCACCTTGTCTGCAGCCTGAAGATACT
TTAGGCTTAATCAAGCACACCAGATTTTTCTTTTCTCACCATTGTTCTTCAGGGGAATCT
CAGGTGGGCTTCAAGTTCTCCATGATAAACAATATTGGATCGATATTCCTCCCGTCCCTG
GGGCTCTTGTCCTTAACCTCGGAGATCTTCTCCGGGTTAAAGAAGTGACTTTTTAGCTTT
GTAACATTTTAGCTCTATCTTTGTTAGGAATATCATATATGAAATAATATGGAATTTAAA
GTAGTAAGTAAAAGATATAGGCTATGGGATCCTCCCTATAATGAGACGNGCGAGACACCA
AAACACGCAGAGATTGGAATATAATACGGAAAGACTCTAATTAGAGGAAAAAAAAAAACA
ACGAAATTTGGAAGGGACGAAATAATAATCAAATTTTATCAGTAACAAAAAGCACCAAAC
ATGAAACACGA
GenBank Accession BX896377 [GenBank]
Graphic View Graphic view of gene At3g61400
Predicted Position of Insertion Chr3:22719801 - go to primer design
BLAST e Value 8e-143
Hit Clone Code (BAC ID) T20K12
Hit Gene Code At3g61400 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37