SimpleSearch - Line and FST details


Line specific information

 
Line ID 757A06
Vector Used pAC161
Line Availability available as T3 set from NASC (N472582)
Segregation Analysis 50:39:38
Confirmed for Hit At3g55710 At5g16480
Parent of DUPLO pair 2649
Parent of pair(s) 8621, 8628, 11308

Gene hit At3g55710

 
Sequence (A. th genome BLAST matches underlined) 
>41-K023930-022-757-A06-8409
CCATTTACAATTGAATAATAACGTGTTACTTTATTACACCACCTTGTCACTTCTCTATAA
AACAGCTTTTTTATATAAAATAAGTTGCAATTGGGTAGTTATAATACATGTTATTGGATT
ATATAATCCAAAATTTTCGCCTCGAAGGATTAGTTTCCGTTTTGGTTTAAGATTCCTGGT
TGAAAAAAAAGTTTCTTAACATTTTTTTAGCGGTATTAAAGATTTGCCACCCACTATTTT
TAACTTCAGGTTCTATGGTATCTGCCCTATGGTGTGGACCCTACACTGAGGAGGGGTAAG
GCTCGAAANNGAGAGGAGATACGGATTTCATCTTCAGATGGGTCTGAGATTATGCGAAAA
TATACACTCATATACATAAATACTGACAGTTTGAGCTACCAATTCAGTGTAGCCCA
GenBank Accession FR815389 [GenBank]
Graphic View Graphic view of gene At3g55710
Predicted Position of Insertion Chr3:20674684 - go to primer design
BLAST e Value 1e-76
Hit Clone Code (BAC ID) F1I16
Hit Gene Code At3g55710 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation UDP-Glycosyltransferase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At5g16480

 
Sequence (A. th genome BLAST matches underlined) 
>28-K118445-0022-757-A06C-8409
CATTTACATTGAATATATCCTGTTTCCAGACAAACCCAACAAACAAAACTCNGTTTTTGT
AATCAAATCTTTCTGCGTGGGTCAAATTTCAACAACACAAATATATAATTATCCCACATT
TTTTTGACATTTAACTAATAAAAGCCATGAAAGTGAAAGTGGTGATTTAAGGAATCTGTC
TATCTATAAACAACGACAACGATGCGTTATTAAATAAAAGATTCTTCTTCTTTTTTTAAT
TTTTAACAAAAGATTCAGAAGAATGAAAGAAGAGAATCTTACATGATGGATCGAAGATTT
AGGGTTGATAAGAATCCGAAATTCTCCAGCTCAGGAAACCCAGATCGGTAAATTTCATCT
TCTACCATTGAAAAATTCGGCGGCGGAATCAAAACTTCTCCATCGTATTCATCATC
GenBank Accession HG969109 [GenBank]
Graphic View Graphic view of gene At5g16480
Predicted Position of Insertion Chr5:5382208 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MQK4
Hit Gene Code At5g16480 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Phosphotyrosine protein phosphatases superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX896515 [GenBank]


Last Updated on 10.06.2021 13:37