SimpleSearch - Line and FST details


Line specific information

 
Line ID 759F12
Vector Used pAC161
Line Availability available as T3 set from NASC (N472840)
Segregation Analysis 50:47:34
Confirmed for Hit At5g37660
Parent of DUPLO pair none
Parent of pair(s) 3262

Gene hit At5g37660

 
Sequence (A. th genome BLAST matches underlined) 
>94-K023798-022-759-F12-8409
GAAGCCATTTACAATTGAATATGATAACATGTCCAATTGTCCTCTTTGCCCTTTCACTTG
TGGTGGAGCCCTCCAGCTATGGGATCCTCCCTATAGTGAGTCGTATTACTCACGGGATTA
GACTGAAATGGAAACACAATGAGAAAGTAGCTATAGGGAGAAAAAGGAATTGGGGCCTAA
GCTATCCTTTGAGAAAAAATAAGAAGGGGGGGGGGGTGAAAAAACAAATAAAAATATCAA
GAAATAAAATAT
GenBank Accession BX896753 [GenBank]
Graphic View Graphic view of gene At5g37660
Predicted Position of Insertion Chr5:14960181 - go to primer design
BLAST e Value 2e-14
Hit Clone Code (BAC ID) K12B20
Hit Gene Code At5g37660 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation plasmodesmata-located protein 7
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit MSF3

 
Sequence (A. th genome BLAST matches underlined) 
>94-K023802-022-759-F12-8409
CGGAAGAACCATTTACAATTGAATATGATAACATGTCCAATTGTCCTCTTTGCCCTTTCA
CTTGTGGTGGAGCCCTCCAGCTATGGGATCCTCCCTATAGTGAGACGTATTACTCACTGG
ATTACACTGAATTGGTAACTCAATGAGTTGCTAGCTATAGGGATGACAAGAAATTGTCGC
ATAATTTATTGACTTATAAAATATGAAAAGGGGGCTAGATTATAGTACAAAACAATAATA
TTTATAAATTATATATTCACAAAGGATCTTTTTCATTACATAAAAAAAGAAATTCTCGCA
TCAATGCATCAAACGTAACACTTATACAATTCCTCATTCCCTTATGCATAGATCCCTTGG
ACATGCGCATAGAGGAGTGATATTAAGCTAGAATACACCGGGATATGCGGAATACTGGGG
GTTTGAGCTACAAATTCAGGGTACCCTTTTTGAAAAAAAAACTACGAAATGCGAAGATCC
ATATAAACAAAGGAGGCGCACTTTTGCAAAAACGAAATTTTATCTATATAAAAA
GenBank Accession BX896754 [GenBank]
Graphic View Graphic view of sequence BX896754 of line 759F12
Predicted Position of Insertion Chr2:8147128 - go to primer design
BLAST e Value 9e-47
Hit Clone Code (BAC ID) MSF3
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37