SimpleSearch - Line and FST details


Line specific information

 
Line ID 760E09
Vector Used pAC161
Line Availability available as T3 set from NASC (N472921)
Segregation Analysis 50:48:46
Confirmed for Hit At3g55240
Parent of DUPLO pair none
Parent of pair(s) 92089, 92090

Gene hit At5g66750

 
Sequence (A. th genome BLAST matches underlined) 
>69-K024639-022-760-E09-8409
GTATGACGAGAGGCTTATTTGACATTACCTTGGGTCAGAGGACGATGCTAACCAAATGAT
GCAGAGGATTATCTCGGACTCATCTATAGAATCCAACGAGGGATCGCGATGTTCGATCGA
TAGATTTCGAAAACCTTATAGGTTATGTATATGAATCTCTCGGCAGCGATTTATCCCTGA
CGCATGCATGTTTATTGGTAAGTCGTTTTTTCTTCTTATCATCGGTCCATCCAGCATTAC
CGCTTTCAAAGGAGTGATGAGTGTCTTTTTGGTACGTTATGCGTACGTGGGCCACATAAG
ATTGCCTCTGTTTATTATATCTGATGAAACGGACACTATGGTATCCTCCCTATAGCGAGA
TCATTTTTCGATCTGCAAATTGGCCGGAGGAAGAAAATGATCAACGGAGAGACCCCAAAC
ATTAAAATCAACTTCTTCTATCCTCCACTTCTCCGTCATCTGTCTCCGATGATTCGCCGA
CGCTTCACCGTACCGGAAAACCGTGACCGAT
GenBank Accession BX946279 [GenBank]
Graphic View Graphic view of gene At5g66750
Predicted Position of Insertion Chr5:26648927 - go to primer design
BLAST e Value 9e-81
Hit Clone Code (BAC ID) MSN2
Hit Gene Code At5g66750 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation chromatin remodeling 1
Insertion Classification TS2TE (5')
Confirmation Status unknown

Gene hit At3g55240

 
Sequence (A. th genome BLAST matches underlined) 
>69-K024594-022-760-E09-8409
AGAGAACGAGGAATTCTTCGGGGGGTATGAGGAGAGGCTTAGCTGACAAGAGCACATGTC
GGAGGAAGAGACAAACCAGATGATCCAGAAGATTATCTCGGATTCATCTAAAGAATCCGA
CGACTGATCGCGATGTTCGATCGTTAGATTTCGAAAACCTTATAGTTTATATATATGAAT
CTCATGAAAACGATTTATCCCTGACGCATGCATGTTTATAAGTAAATCGTTTTTTCATCT
TAGCATCGGTCCAACAAGCAAGACAGCAAAAAAAGGAGTGATGACACTCTTTTTGGTACG
TTATACGTACGTGGTCCACATAATATTGCCTCTGTTTAATTATATATAATGAAACGGACG
CTATGGGATCCTCCCTATAGTGAGAGCNANTANNCATTCTCATAATACGTAATTACTGAC
AGTTTGAGCTACCATTTCATTGTANCCGATTGCCATTTCATCTTCAGATTGGGCGGAGAT
TATGCGAGTCTATTTCCTCAGATACATGAATACTGCCAG
GenBank Accession BX946278 [GenBank]
Graphic View Graphic view of gene At3g55240
Predicted Position of Insertion Chr3:20474002 - go to primer design
BLAST e Value 1e-172
Hit Clone Code (BAC ID) T26I12
Hit Gene Code At3g55240 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Plant protein 1589 of unknown function
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37