SimpleSearch - Line and FST details


Line specific information

 
Line ID 764B10
Vector Used pGABI1
Line Availability available as T3 set from NASC (N473270)
Segregation Analysis 50:20:15
Confirmed for Hit At2g27460 At4g28220
Parent of DUPLO pair none
Parent of pair(s) 3706, 3754, 9856

Gene hit At2g27460

 
Sequence (A. th genome BLAST matches underlined) 
>74-K023870-022-764-B10-8409
CAATTCCCAGCCCCTTGATCCAGCCTCCAATAGGTATTGAAGTAGGCCTAGCAGTTTTCC
CCACGAGGAAGAAGATGACCGTTAGATCCGCCCCCCGGTCCGATTCCCTTCCCCACTTTG
GCCGCGAATGGTGTTACTGTCCGTCCCCCAGGACGTCCCGACCCCCCTTGAGC
GenBank Accession BX897025 [GenBank]
Graphic View Graphic view of gene At2g27460
Predicted Position of Insertion Chr2:11741090 - go to primer design
BLAST e Value 2e-38
Hit Clone Code (BAC ID) F10A12
Hit Gene Code At2g27460 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation sec23/sec24 transport family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX897026 [GenBank] BX897025 [GenBank]

Gene hit At4g28220

 
Sequence (A. th genome BLAST matches underlined) 
>74-K023908-022-764-B10-8409
CATTTAAATTGAATCTTTCATTGCAGCTCCACCTGCGGATACCTCACAATAATATCATCA
ACCACGCCTTCTAACTCTTCCATGGTCAAGGTTCCTGAGTTGTCCGCATCTGCAGCTTTG
AATATGTTTGCAATATCCCCCTAAATTAAGATTCACAAGAATCTATCAAGATTTAGCATG
CATATGAAAAAAAGAAGGGAATAGCATCAACAGTCTAATGGGGTTCACAGACCAAGATTT
TTCGTTGAGCTATGGAAGCACAATCGCCAACTGCATATACATTCTCACATCCTGTCACTT
GTAACCACTCGTTAGTTGCCACCGCACGTCTGCCTCCTTGGCCAACTTGCTCCATGAAGT
CGCTGATAACTGGACGGGTTCCAACTCCAGTGGACCACAATATCAATCCATGAGGAATAC
TTACGAGTTCTCCACTTGATTTGACTTTCACTGTGATATCTTTATCAGTCACAGACATTA
CACGCATTCCAGTCTGAACATCAATACCATCTCGCGTGAACTTTTGTTCAGCAAATGA
GenBank Accession CU589948 [GenBank]
Graphic View Graphic view of gene At4g28220
Predicted Position of Insertion Chr4:13994931 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F26K10
Hit Gene Code At4g28220 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation NAD(P)H dehydrogenase B1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37