SimpleSearch - Line and FST details


Line specific information

 
Line ID 764G03
Vector Used pGABI1
Line Availability available as T3 set from NASC (N473323)
Segregation Analysis 50:48:46
Confirmed for Hit At5g22440
Parent of DUPLO pair none
Parent of pair(s) 814, 2955

Gene hit F10N7

 
Sequence (A. th genome BLAST matches underlined) 
>23-K024029-022-764-G03-8409
NAGCCATTTACATTGAATATATCCTGAACCTGATAATTTAAACCGAAAGCGCGAAACTAT
AAACCGACCCCTCGGTTAGGGAACCCCCCCAAAAGGGAGCTACCCCGTTACACCCGTAAC
CAAAGACCGGAAAATAGTACCTTTTCCCCCCCTCTTGAACCTCCCCAACTTTATCCCTAT
TTTTACCAGTCTCTCATACCGGACTTCGTCCCTTGACAGCTACCGACTACCTTGCTCGAT
TTCCTCCCTATTCTAAGCTTATAAGGCCTAAATTGCTTCAGGCCCAATATGGATCTGGTA
ACGTATGTCACTCAAGTCAAGAGTTAAAGCCCAAAAGAGCCATATGTGTTGCCTGTCACC
GAAAAACACAAAATGAGCTTGATATTTCATTAGTTGCATCAAATTTTATAGAATCTTTGT
ATGGGATCCTCCCTATAGTGAG
GenBank Accession BX897173 [GenBank]
Graphic View Graphic view of sequence BX897173 of line 764G03
Predicted Position of Insertion Chr4:15507649 - go to primer design
BLAST e Value 2e-88
Hit Clone Code (BAC ID) F10N7
Insertion Classification Genome Hit
Confirmation Status unknown
Other FSTs Supporting this Hit BX897170 [GenBank] BX897173 [GenBank]

Gene hit At5g22440

 
Sequence (A. th genome BLAST matches underlined) 
>23-K024030-022-764-G03-8409
ATTGAATATATCCTGGAGTCCCGTGAATACTTCACTGTTGCCTTTGTCTCATTCACTTCG
GATTCCAAAGACTCCTGGTGGCCAACGAGAGTTGGGAATTTTCCTGTTCATTGCTCCTAA
GAGTCCAGATTTAATGTAGCATCATATAAAGAGGATACAAGAACATATGCAAAGATTAGG
TAAGGTTAGAGACATGCCTGCCTTGTTGAGACCAGGACCAAGAATACGAGGAATCCGCTT
AATGACAGATTCAGAAGCAAGGAAAGCATGGAATTTCTTAGCAAGCTTCTTAACAAGTTT
CTTGTTCTTGTTCAACTTCTTAAGAGCTTCCACATCCATAGATTCCAATCCAATCTTCTC
AGCCTAAGTAAACCAACCGCAAGTTATAGTATGGGATCCTCCCTATAGTGAG
GenBank Accession BX897174 [GenBank]
Graphic View Graphic view of gene At5g22440
Predicted Position of Insertion Chr5:7435598 - go to primer design
BLAST e Value 2e-180
Hit Clone Code (BAC ID) MWD9
Hit Gene Code At5g22440 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ribosomal protein L1p/L10e family
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX897174 [GenBank]


Last Updated on 10.06.2021 13:37