SimpleSearch - Line and FST details
Line specific information
| Line ID | 764H03 |
| Vector Used | pGABI1 |
| Line Availability | available as T3 set from NASC (N473335) |
| Segregation Analysis | 50:47:28 |
| Confirmed for Hit | At2g21120 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 42282, 84299, 84300, 84301, 84303 |
Gene hit F23E12
| Sequence (A. th genome BLAST matches underlined) | >24-K024030-022-764-H03-8409 GCGCTCTTCCTCTTCAGCAGGAAAGCTTTTACCAATTCAGCAAATCAAGAAGCTATATAA ATGCCGCACTTAACGTATTGAAACTTACGATCAAATATCAATCTCTCTCTCTTTCGACCA ATGGACTAAATCAAAACTTTTGATTTTCCGGCGATGTCAACGTCTCTAACCCTCGGCGGC GCCACACGTTGTGGCCGGATCATAAATCCATCATTAGACCAGATCATAAAAACCGCTGCG TGGCGTAAACCCACGTATGGA |
| GenBank Accession | BX897202 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:16819482 - go to primer design |
| BLAST e Value | 1e-126 |
| Hit Clone Code (BAC ID) | F23E12 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
Gene hit At2g21120
| Sequence (A. th genome BLAST matches underlined) | >24-K024029-022-764-H03-8409 ATTTACAATTGAATATCTTTGTTTTTGGGTGTTCTGTATGGGATCCTCCCTATAGTGAGA CAGCATGGGTATCCCTCACGATAGTGAGAGTATGGGATCCTCCCTATAGAGACGAGCCTC ATGAGTCTTAAAACTGGATCAATCAACAAATCTGCGGTCGGGTTCATTTTTGTATTGTTT TATGGTCACTGTATGGGATCCTCCCTATAGTGAGANNGTAANCTATCCATCCTATAATTC GAATATGTGTGCTCATCTTCATAAGAAAGTACAAATCCTCTTACCATCCGGTATCTTTCC CAAACATTAACTATCGCTAACAATTTACTTAACCATGCACATACTCCAAAGAACGACATA TTACTCCTCTTATATATCCACCTTGAATCAACCGAACAAAGACTTACACTATCACTATCA TTGGGTCAGAAACTAATCATAACTCTCCTGCCACACATCCTCTTAACCAACCCTACAAAG ACACCAAACAAACACATATCATAACTCTCCCACTACCTACAAATTAAAAATCAATCCA |
| GenBank Accession | BX897201 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:9052123 - go to primer design |
| BLAST e Value | 3e-37 |
| Hit Clone Code (BAC ID) | F26H11 |
| Hit Gene Code | At2g21120 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | magnesium transporter, putative (DUF803) |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit MLD15
| Sequence (A. th genome BLAST matches underlined) | >24-K023908-022-764-H03-8409 CCGGACAGAAGCCATTTACAATTGAATATGGTATGGGCCCCCGATACACGAAAACGAGAC CCGTCCCCTTACTCGAGCGTCATGGCCAACCGTACGGTAACCACACTAGAATTTGAACCA ACCTCATAAACCAAACCGGTTATCAATTCAAGTTTGGTTAAGAAACTTATACCGATCGCA TGCACTGTCCTGATAATAAATACGGACTGAAAACTCTGCATTTGTTCTTATGTATCAACT GCATGTGCGCTTGCAGTGCTTTTATTTCTCTTCATTGACAAAATTAAATTTTCATTTTTT TGGAAAATTTTTTACTAGTATGGGACCCTCCCTATACTGAGTCACCCACACCCTCTCTCT CCCTAAATCTTAATCTCCCTCAACAACACAATCTTAAGCTAACCCCCCCTCTCCCACCTA TAGACCCACCCCATATACTAAACAAATCTCCTCTCCCTACTAACTAACACACATCTCACC GTTCCTTAACACCCCATCCCCAATTATACCCCCACTCTTCACAAAACCAATCACTACCCA ATCACCAAACATAAC |
| GenBank Accession | CU590002 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr3:10908713 - go to primer design |
| BLAST e Value | 7e-94 |
| Hit Clone Code (BAC ID) | MLD15 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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