SimpleSearch - Line and FST details


Line specific information

 
Line ID 768F05
Vector Used pAC161
Line Availability available as T3 set from NASC (N473697)
Segregation Analysis 50:48:46
Confirmed for Hit At5g65980
Parent of DUPLO pair none
Parent of pair(s) 58239, 92187, 92188

Gene hit At5g65980

 
Sequence (A. th genome BLAST matches underlined) 
>38-K023590-022-768-F05-8409
AGCCATTTACAATTGAATATATCCTGCTGATCCGTGTAGATGTCCCGGACATGAGGCCGT
TTCCCCTAGAAGAACTTGAACGATTGGCATTGAAGCCAGCTCCAACAACTCTAAGAAACC
CATCCCTAATCTCTTCTTTTTCTTTTCTTTTCTTTTTTTCTGGTTTCTTGTAGAAGAAGA
GAAGCAGTCAAGGTTAAAGATATAGAGATGAAAGGTTTGATATTTGGGCTGTTTGTGTAG
ATGGAGAGGATTGGTGTTTAATACATCGAGAGACCAATGGTACTGGTGTATGGGGTGAGG
CAGGAAATAAAGACGATAGCGAATACAAATAGCTGGCATGACGCGCGGAGCAGAGAGAAA
AGAACGAGTAAATGGGGTAGGGCTGCCGATAAGAGGCGGAGGCGATGAGGAGGTAGGTCG
ACGAGATATGGGGGAGAGGAAGGGAGGAAAAGCTGAAGGAGAGAG
GenBank Accession BX897512 [GenBank]
Graphic View Graphic view of gene At5g65980
Predicted Position of Insertion Chr5:26392530 - go to primer design
BLAST e Value 3e-59
Hit Clone Code (BAC ID) K14B20
Hit Gene Code At5g65980 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Auxin efflux carrier family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX897513 [GenBank]


Last Updated on 10.06.2021 13:37