SimpleSearch - Line and FST details


Line specific information

 
Line ID 769A07
Vector Used pAC161
Line Availability available as T3 set from NASC (N473735)
Segregation Analysis 50:37:24
Confirmed for Hit At5g50800
Parent of DUPLO pair none
Parent of pair(s) 4799, 4807, 4818, 4875, 10136, 81908

Gene hit At5g50800

 
Sequence (A. th genome BLAST matches underlined) 
>49-K024642-022-769-A07-8409
CCTTCAGATTCATTGAATTTAGCTGAACTTCTGAGCCACATGTAGTTTTGCACCATTTGA
GAACTACGTGTAGAATGATTTGACCAGATGCAATGAACTCCCCTATTACATTGAGAGGCT
GCAATAGTTCAAAAGACGTGGAAAGGACATTAATATTCCATTTATTGTCGACAAAAGAAG
TTGGCAGAGAAAAATTATAGAAGGGAAATTACCGACATCACAACATAACAAATTAGTTTT
TTTGTTTCTATGGGATCCTCCCTATAGTGAGACGNATCACTCCGCAGGACCCCGCGATTC
TCGATATCCTCGACTTCATAGTATCCTACATACATTGACAATATAGTCTCCATAATTTTG
AAATGGACTAAATGAAGGTATCACTATATGAATGTTAACATAATTACAAATTAAACATCA
TACATAATTAAAATAAATATTGTAAA
GenBank Accession BX946609 [GenBank]
Graphic View Graphic view of gene At5g50800
Predicted Position of Insertion Chr5:20665499 - go to primer design
BLAST e Value 2e-51
Hit Clone Code (BAC ID) MFB16
Hit Gene Code At5g50800 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Nodulin MtN3 family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX946610 [GenBank]


Last Updated on 10.06.2021 13:37