SimpleSearch - Line and FST details
Line specific information
| Line ID | 770C01 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N473849) |
| Segregation Analysis | 50:49:49 |
| Confirmed for Hit | At5g12370 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit F23K16
| Sequence (A. th genome BLAST matches underlined) | >03-K023591-022-770-C01-8409 AGCCATTTGCAGAGATGATGATATTGAAGCACCCTTATAGCGTCCTATTGTCCCAGATGA CTCTGAGACTTGCTGACTCTCAGCACGCAGTTCTTCCATCTGTAAAGAAGAACTCATTCA CTTCACATTAATGAACAACATAGCAACTATGGGATCCTCCCTATAGTGAGTCGTATTACT CACGGGGTTACTCGGGATTGGTGACACATAGTTCCTTTAGCTGTTGAAGGTATCGTTGAG CGAAATTTTGTATTTGTCTTTGCTGCGTTTTTTTGAAGAGTTTAAATTTCCTTTTGTCAT TAATAGAATGCTTTTTCGGCCAAATTTTTGTTACCACAATTTTAATGATAAAAACTTTAA ATTTTTCAAAAGTGGACTACTTTCGTATACCCAATATTGTCNCCCAAACCAATCAACCAG ATTATC |
| GenBank Accession | BX897576 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr4:18332267 - go to primer design |
| BLAST e Value | 2e-60 |
| Hit Clone Code (BAC ID) | F23K16 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
Gene hit At5g12370
| Sequence (A. th genome BLAST matches underlined) | >03-K023595-022-770-C01-8409 AATCCGGAAGCAGCCATTGCAGAGATGATGATATTGAAGCACCCTTAGAGCGTCCTATTG TCCCAGATGACTCTGAGACTTGCTGACTCTCAGCACGCAGTTCTTCCATCTGTAGAGAAA AACTCATTCACTTCACATTAATGAACAACATAACAACTATGGGATCCTCCCTATAGTGAG TCGTATTACTCACGGGGTTAGCCGGAATTGGTAACTCGGGGGGCTGCTCCCTATAGGGAG ATTAAGGGATATCGGCCAATTGGGAGCACAAGGGAACGGGGTGCGAGGGGGGTTGGGGGG CTGC |
| GenBank Accession | BX897577 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:4005603 - go to primer design |
| BLAST e Value | 4e-55 |
| Hit Clone Code (BAC ID) | T2L20 |
| Hit Gene Code | At5g12370 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | exocyst complex component sec10 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |