SimpleSearch - Line and FST details


Line specific information

 
Line ID 770D07
Vector Used pAC161
Line Availability available as T3 set from NASC (N473867)
Segregation Analysis 50:48:47
Confirmed for Hit At1g77890
Parent of DUPLO pair 12734
Parent of pair(s) none

Gene hit At1g77890

 
Sequence (A. th genome BLAST matches underlined) 
>52-K023591-022-770-D07-8409
AGCCTTTACAATTGAATATATTCCGGGACGTGAAGCCATATTGACCAAACTGAGTTTCTT
GACAGAGACTCAAAACAGAGCATTTTATTCATATCTTTTGACCTATGGGATCCTCCCTAT
AGTGAGTCATATTAGCTCGGGCTCCCCACTTATCTGGGCAACCAATGCGTCCCAACAAGT
ATTGAGCCTTTCCAGGTACACACCTTCTACTTTTCTTTAGTTCCTATCGACACGTTTATT
TTAATACCCGTGATTCAGGACAACAGGACGATACATTTTGGCAGGAGCCCAGATTGTCTA
TATGCCCTTTGCTCCTACCCAAAGCGTCCTTAATTCTATGGGATCCTCACTCTAATGAGT
AGCAACCTGAATCGCCCTACCATTCTGATAATCAGTCACAGGATCTATCTAATATTATTT
AACCTGGCACCGACGCAGCCATGCTGGACACTTTCTACATATCTCGAAAC
GenBank Accession BX897596 [GenBank]
Graphic View Graphic view of gene At1g77890
Predicted Position of Insertion Chr1:29295292 - go to primer design
BLAST e Value 6e-48
Hit Clone Code (BAC ID) F28K19
Hit Gene Code At1g77890 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation DNA-directed RNA polymerase II protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g77920

 
Sequence (A. th genome BLAST matches underlined) 
>52-K023595-022-770-D07-8409
ATTGAATATATTCCCGGACATGAAGCCATATTGACCCAACTGATTTTCTTGATAGAGACT
CCAAACAGAACATTTTAAACATATCTTTTGACCTATGGGATCCTCCCTATAGTGAGTCGT
ATTACTCCCGGNNTTCCCCCTATTTTTTATCCCAATGAATTACCCA
GenBank Accession BX897597 [GenBank]
Graphic View Graphic view of gene At1g77920
Predicted Position of Insertion Chr1:29299722 - go to primer design
BLAST e Value 3e-22
Hit Clone Code (BAC ID) F28K19
Hit Gene Code At1g77920 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation bZIP transcription factor family protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37