SimpleSearch - Line and FST details


Line specific information

 
Line ID 778D03
Vector Used pAC161
Line Availability available as T3 set from NASC (N474631)
Segregation Analysis 50:49:34
Confirmed for Hit At5g39500
Parent of DUPLO pair none
Parent of pair(s) 146

Gene hit At5g39500

 
Sequence (A. th genome BLAST matches underlined) 
>20-K024661-022-778-D03-8409
TTTATCTTCATCCATCTGAATCTCACTGATGGCTGGATTGAGCTGATAAATCTCAAATAG
GTACTGCTCTATGAGGATCGCTCCGCTATAATGAGTTGCTGCTACACTCAGTGGTTTTTG
AGCAAGCAGAGCAAGAAGATGTTTTGCGGAGATGTATTGATGGGTTATTGCCCATTGCAA
AACTTTCAGCATATTATCATTTGAATAGTGTTTTGGATGATCTGGTCNTGTCTCTCTGCA
AATTCACACCCTTCTTCTCCCCATTATCTGCTGATGAAGCTGTTCTTGTTCTATGGGATC
CTCCCTATAGTGAGAACTGTCAATTGATTACAAATTTCCAAAAATCTAAATTTAGGGATG
AGATGGTGCCACATTAAAAAAGGAAGATGTAGGTACATCTATAATCAGAAAATAAATTGA
TCATCTGTGAAGAAAAAAATGCATAAGTGAAATACAATATAATATAAAGAGGGAAAGGAG
TTAATTCCGGAAGTGGAAAAGTAACAGAAACAAATGTAGAACATAAAAT
GenBank Accession BX947231 [GenBank]
Graphic View Graphic view of gene At5g39500
Predicted Position of Insertion Chr5:15817901 - go to primer design
BLAST e Value 7e-97
Hit Clone Code (BAC ID) MUL8
Hit Gene Code At5g39500 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation GNOM-like 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR815718 [GenBank]


Last Updated on 10.06.2021 13:37