SimpleSearch - Line and FST details


Line specific information

 
Line ID 780C03
Vector Used pAC161
Line Availability available as T3 set from NASC (N474811)
Segregation Analysis 50:46:34
Confirmed for Hit At5g06050
Parent of DUPLO pair none
Parent of pair(s) 3069, 8077

Gene hit At5g06050

 
Sequence (A. th genome BLAST matches underlined) 
>19-K024820-022-780-C03-8409
CCTCATCAAGGCTTCTCGGCCACGGAATCGGACTACGGAATCCTTGTAGTATCGGGAACG
TTGGATTTCAATCCCATTCCATCGTTAGGACAATTCCGTTCAAATCGCTCACCACGCACC
GTATGAATTAGCCTTTGTGGAAAGATTCACAATATCCAAACAAGGAATGTACTCAGACAT
ATTCTCCAAAAAAATCTCAAATTTCCTCACACTAACTCTATGGGATCCTCACAATATTGA
GCAAGTTGGACATAAGGAAGGAATAGTTGTTAAAGGTGAAAAAAAAAGAAATAAGGATTT
GGAATATTAGAAGAGATCATATATCGACCACAAATAAAGAGCAAGGTATTATAAAGAAAG
CGTAGAACGTATATGTACAAATTATAAAGATACGAATAGACATAGATAAAAGATCAAGAT
GAATATGACTGTAACTGAAATTATGAAAAACAACTAAAAGAATTGCTATCGGAAAATACG
GAAAAA
GenBank Accession BX947475 [GenBank]
Graphic View Graphic view of gene At5g06050
Predicted Position of Insertion Chr5:1820863 - go to primer design
BLAST e Value 4e-46
Hit Clone Code (BAC ID) K18J17
Hit Gene Code At5g06050 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Putative methyltransferase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37