SimpleSearch - Line and FST details


Line specific information

 
Line ID 781E10
Vector Used pAC161
Line Availability available as T3 set from NASC (N474938)
Segregation Analysis 50:48:38
Confirmed for Hit At5g49560
Parent of DUPLO pair 1331
Parent of pair(s) none

Gene hit At5g49560

 
Sequence (A. th genome BLAST matches underlined) 
>77-K024927-022-781-E10-8409
GNAGCCATTTACAATTGAATATATCCCTGATAGAGATGGTCATGATACACCACCTCCGAA
GCCAGAATCAAGTCAACGTTCTGACCTATGGGATCCTCCCTATAGTGAGACGTATTACTC
CTCCCTTTAGTGGGACTTGGTAATCCAGTGGCTTATGGGGCTTGGGGAATCCGGGGGGTT
TTGCCTTTTTGGGGACCCGGGGGAATTTGGGCCGGGGGGCACAAGTTTTAATAATTCCCG
GGGAAAAGGGCGATTTGGAAAGAATGTTTTCCTGGAGAAATTTGTCCTCTAAGGCTCGTT
ATAAAAGTAAATAAGGGGGACTTTCTTAATGAATGGGTAATCCCCAGTATGGGGGGACAC
GGGGTTCCTCCTCAGAGTGGGCTGAGATTATGCGAAAATATACGCTCATATACATAACTA
CGGGCTGTTTGAGCTACCAATTCGGTGTAGCCCATT
GenBank Accession BX947567 [GenBank]
Graphic View Graphic view of gene At5g49560
Predicted Position of Insertion Chr5:20111199 - go to primer design
BLAST e Value 3e-22
Hit Clone Code (BAC ID) K6M13
Hit Gene Code At5g49560 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Putative methyltransferase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX947566 [GenBank]


Last Updated on 10.06.2021 13:37