SimpleSearch - Line and FST details


Line specific information

 
Line ID 784G06
Vector Used pAC161
Line Availability available as T3 set from NASC (N475246)
Segregation Analysis 50:41:33
Confirmed for Hit At5g25780
Parent of DUPLO pair none
Parent of pair(s) 11852

Gene hit At5g25780

 
Sequence (A. th genome BLAST matches underlined) 
>47-K024868-022-784-G06-8409
GTCGCTCACACTGAAGAGATTCTTCTGCCTCAGCTCTACCTTACTCGGGATTTGGACTAT
GGGATCCTCCCTATAGTGAGTCGTATTACTCACGGGGTTGGCTGGATTTGGTAGTGCAAT
GGGTTTGCCGCGATTGGGTGTTGTATGTCTTTGGGGTTGTGTTGGGGGGGGTGTTTAGGT
TGCCATTTTGCATGTTTAGTTTACGGAGGTTTTGGATTGATGGTTGTCTTTTGCGAGGGG
AAGGATTGTTCGATATGCTTTTTATTTGGGGTTAATTACGATTTGGTTCATACGCGTGTG
GATATCTCTACTGTGATTGTTGTGCTTTCTGTTGATTGTAGTATTTAATGTTTATTGGAA
GAGAGTTTGCCGATGTGTCAGTGCTTTGTTTGGTGTATGATATGTGGTGTTATTTATGTT
AGGTACGGGGAGTTATGTTGTTTCTAAATTTATATTGA
GenBank Accession BX947766 [GenBank]
Graphic View Graphic view of gene At5g25780
Predicted Position of Insertion Chr5:8974509 - go to primer design
BLAST e Value 3e-25
Hit Clone Code (BAC ID) F18A17
Hit Gene Code At5g25780 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation eukaryotic translation initiation factor 3B-2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX947766 [GenBank]


Last Updated on 10.06.2021 13:37