SimpleSearch - Line and FST details


Line specific information

 
Line ID 787E10
Vector Used pAC161
Line Availability available as T3 set from NASC (N475514)
Segregation Analysis 50:43:38
Confirmed for Hit At3g01500
Parent of DUPLO pair none
Parent of pair(s) 83961

Gene hit At3g01500

 
Sequence (A. th genome BLAST matches underlined) 
>77-K024931-022-787-E10-8409
AAGATTCTGTGACGGTTGCTGCGGCTCAAGGGGAGCCTATCTATACGGCTCTTCAGACAG
GTACTTCATCCGACAAGAAAGCTTTCGACCCCGTCGAAACCATTAAGCAGGGCTTCATCA
AATTCAAGAAGGAGAAATACGAGTAATATATATTTCTATTTCATTTGTTTGTTCTTAATT
ATGTCACCAACTAAAGTGGTCTATGGGATCCTCCCTATAGTGAGTGGAATCAA
GenBank Accession BX948129 [GenBank]
Graphic View Graphic view of gene At3g01500
Predicted Position of Insertion Chr3:196616 - go to primer design
BLAST e Value 3e-84
Hit Clone Code (BAC ID) F4P13
Hit Gene Code At3g01500 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation carbonic anhydrase 1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At5g50890

 
Sequence (A. th genome BLAST matches underlined) 
>77-K024947-022-787-E10-8409
TGGGGCACCAATAGCAGTACTTGCGCTGCGAGGATCGATACTATAGAGTCTTACAATGAG
ACGTGACATAGAAGATGATCTCCGATTTTTAGCTTGGGAGAGCCTTGAAGGTTCTGTGAG
GTTTGATGTTGCTCTAGGGGAGCAGCTCTCAGCGGCTCCTAAAAATGGGACTTCTTCTGG
GGGTGGAGCTTTCGACCCCGTCGAAACCATTATTCAGGGTATTCATCAGATTCGCAGGGA
GAAATACGAGTAATATTTATTTCTATTTCTTTTGATT
GenBank Accession BX948130 [GenBank]
Graphic View Graphic view of gene At5g50890
Predicted Position of Insertion Chr5:20703444 - go to primer design
BLAST e Value 8e-60
Hit Clone Code (BAC ID) K16E14
Hit Gene Code At5g50890 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation alpha/beta-Hydrolases superfamily protein
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37