SimpleSearch - Line and FST details
Line specific information
| Line ID | 788C12 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N475588) |
| Segregation Analysis | 50:50:49 |
| Confirmed for Hit | At4g12960 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 10782, 54158, 90176 |
Gene hit At5g28010
| Sequence (A. th genome BLAST matches underlined) | >91-K024821-022-788-C12-8409 ATTGGATAAACTTGAATCTCTTTGGAGTTTTGAGTGGTTAAAAGAATACATGAAATTAAT ACCATCATCTGTTATAATAGAGAAAATTCTAAATTTTACCTATTTAACAACTTTGAGAGG GTTAACTCTTCAACAAAAATATGTGCTTGAATTTGATTTTCTTATGATTACTTATTTATC CCCTGAATTAAAGTAATTATGTGGTATATATATTTTGATGGATAGATTTTAGTTTCATAG TCCAGCTAATTTCGAGAACTAATCAAAGAAGATCCATAGATACAATTTATTAATATCTCC AGCGGACTGTTCATCCATATGTGACATGTTGTTTATAACAATCATGGTTTTAAAGTATTT TAAAACCTTTATAATATTTAAGAAAGGTTTCACAGGTTGTATCGCAAGAGAATCAGTCTT TGCTATGGGATCCTCCCTATAGTGAGACGNAANNNNNNTGNNATCNNNGGANGTGTNGAA ATCGGAAGTAAAGAAGTAAATGATGAGAGA |
| GenBank Accession | BX948229 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:10024751 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F15F15 |
| Hit Gene Code | At5g28010 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | unknown |
Gene hit At4g12960
| Sequence (A. th genome BLAST matches underlined) | >91-K024949-022-788-C12-8409 NAGCCATTTACAATTGAATATATCCTGATCACCATTGTAACAATCATTGATTGCTTTCTC ACGTCCAGAGTTTTTAACACATGATTCCCAGCCTTTCGTATCGCTTTCGACGCACCGTAT GAACGAGTATTGTGATTTCTGCGTTCCATAACCATCACATTTGTCAAACTGTAATTCTAA CATTCAGTTTTCCCTGAATAAAAAACTTAGGAAATAAATCAATTCTTTATATACCTGATC GGGCCAAGTTCTTAATGCGCAAGCTTCAAGGGCGTTTAGTTTGCATTCCTCTTCACCATG CTTCACAACATTCCCAAACATGATTAATAAGAGAAAGTATAACATTAATATACAAGTTAT ATAGATAGGAAATTTATTTATTTATCCACAAGAAGAGGGAGAAATTGAAAAGAACCTGGC AAGTGACAGTCAGATTATCGGAGAGTTCGGCATTACCAAATGGAAACAGCTTGAGATCAA TGATTGTGTAAAGATCGTAGTCAAAGA |
| GenBank Accession | BX948231 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:7583947 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F25G13 |
| Hit Gene Code | At4g12960 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Gamma interferon responsive lysosomal thiol (GILT) reductase family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
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Last Updated on 10.06.2021 13:37 |
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