SimpleSearch - Line and FST details


Line specific information

 
Line ID 791F09
Vector Used pAC161
Line Availability available as T3 set from NASC (N475909)
Segregation Analysis 50:48:39
Confirmed for Hit At5g59680
Parent of DUPLO pair none
Parent of pair(s) 6712, 6716, 6720, 6726, 6733, 10740, 10753, 72916, 72987, 73014, 73075, 73104, 73131, 73158, 73186, 73234, 73254, 73302, 73325, 73345, 73404, 73423, 73470, 73471, 73472, 73473, 73474, 73475, 73477, 73478, 73479, 73480, 73481, 73482, 73483

Gene hit At5g59680

 
Sequence (A. th genome BLAST matches underlined) 
>70-K024937-022-791-F09-8409
CATTTCATGAATCATTTGAGTATATACCATTCGCCTTTCCTTGTAGATATTACCATACAA
GTCGCGTTGAGTGAGAAAAGTGATGTTTACACGTTTCGGGATTGTTTTATTACAGATGAT
CACAAACCCAGCAGTGATTGATCCACCCCGCAGAAAGTCTCACATAACACAATGGGTAGG
GTCCGAGCTTAACGGAGGACATATTGCTGGGAGCATGGATCCAACGCTTACCCGTGACTA
TGATTCTCCCTCCGACCGGACAAATCCTGAACCCACGCCACCCCCCCTCACAACAATCCC
TCATTAC
GenBank Accession BX948645 [GenBank]
Graphic View Graphic view of gene At5g59680
Predicted Position of Insertion Chr5:24050365 - go to primer design
BLAST e Value 1e-77
Hit Clone Code (BAC ID) MTH12
Hit Gene Code At5g59680 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Leucine-rich repeat protein kinase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX948645 [GenBank]


Last Updated on 10.06.2021 13:37