SimpleSearch - Line and FST details


Line specific information

 
Line ID 791G05
Vector Used pAC161
Line Availability available as T3 set from NASC (N475917)
Segregation Analysis 50:42:42
Confirmed for Hit At1g15270
Parent of DUPLO pair 1131
Parent of pair(s) none

Gene hit F14D7

 
Sequence (A. th genome BLAST matches underlined) 
>39-K024967-022-791-G05-8409
TATTTTCTACTTATACTTTACGTCTCCGTTGAATATGTATTGATAATAATTACAGTACTT
TAAAATGCTAAAGTTAAAAACTTATAGATTCTTCGTATTAAAAGGGGAAAGATAGAGCTC
TCCCTCTTATATTGATGTGTCACTTTTTAATTCTCCAATCGAATGTATGCATATGGATTA
AACACAAAAAAAATCGGAAATATATTATAGGAAAAAGTATCATCTAAGTAACGAGTTTAG
CTATGGGATCCTCCCTATAGTGAGTTAATAGAAATGACCCATCTATGGGATCCTCCCTAT
AGTGAGANNNANNGNNNATNCCNAANNNATTATTATANTAANNAATAAATTAATAATAAT
ATTACTATATATAAATTTAATAAATATAAAANATAATATTAAAAACATATAATTACAATA
TCTAAAATANTTATAAGCAAAAAATAGATTCATAAGCGCTTAAAGGAGGGGATAAGCAAG
AAAATGCGCACAGAAAAATAGGGGGGGTTCCCCGGACACAAGAGACCCATTTAAGCTACA
AAATTGGGGAAAAATCTAGGTAAATA
GenBank Accession BX948653 [GenBank]
Graphic View Graphic view of sequence BX948653 of line 791G05
Predicted Position of Insertion Chr1:13290071 - go to primer design
BLAST e Value 9e-112
Hit Clone Code (BAC ID) F14D7
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At1g15270

 
Sequence (A. th genome BLAST matches underlined) 
>39-K024937-022-791-G05-8409
TTTACATTGAATATATCCTTTTTAAGGGCCTGTTTTATCATTTTCATTCAAAACAAAACA
GGTCAGGCTTTCGGTAACAAATGATCACTGTACTTCTCATGCGAAAGAAAGGCTAATGAG
TCTTTCACACAATGTGGGTGGAAAAAAAGTAGACTAAACATCCTAACATGGGCAAATGGT
CACTATTTCATCAAAGTAAGAAGAAACTATGGGATCCTCCCTATAGTGAGACTGATTACT
CTCGCCCCAAACCAAAAAATATTTATTAGATATCGACCCTTCTATGATATCCTCACAATT
AATAACCTTAACTCATATATACACAGAAAAATTTACTCCAGTTAGACCTCAATCATAACA
AAAATTTACC
GenBank Accession BX948652 [GenBank]
Graphic View Graphic view of gene At1g15270
Predicted Position of Insertion Chr1:5250905 - go to primer design
BLAST e Value 2e-85
Hit Clone Code (BAC ID) F9L1
Hit Gene Code At1g15270 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Translation machinery associated TMA7
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37