SimpleSearch - Line and FST details
Line specific information
| Line ID | 794E12 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N476188) |
| Segregation Analysis | 50:47:43 |
| Confirmed for Hit | At3g15810 |
| Parent of DUPLO pair | 12341 |
| Parent of pair(s) | none |
Gene hit At3g15810
| Sequence (A. th genome BLAST matches underlined) | >93-K024939-022-794-E12-8409 CAGTATCATCGTTAGAACTACTAGATAACAAATAAAGGACACTATATGGTTGTGTTAGCA ACTGAGTCGATGACTCGGATTTAGGCTTATACAAAAAGTTGATTAAAATTTTCAGCTCAG AACAATTTCTTCAGATCTCGTTTCTAACAATGATTTTTATCGATTCTATGGGATCCTCCC TATAGTGAGACCAATTAGACCCGCAGAAATGTAGTGTGGGTGACATCAAACGCAAAGTAG ACGCGTCAACGAACGTGATGCTTGGTCGAGATGTGTTCACTCTATGGGATCCTCCCTATA GTGAGTAACATTAAA |
| GenBank Accession | BX948945 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:5348482 - go to primer design |
| BLAST e Value | 3e-71 |
| Hit Clone Code (BAC ID) | MSJ11 |
| Hit Gene Code | At3g15810 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | LURP-one-like protein (DUF567) |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At2g05520
| Sequence (A. th genome BLAST matches underlined) | >93-K025018-022-794-E12-8409 AATTGAATCTACTGTAGATTTCATGTATATACTCATTGCTGATCCATTTGCGTCGGTCCC CTTATTCTGGTTGGATGTTGGACGCATTGTAAATAATTTGAAACTCCATAAATGGCAAAC CCACTATGGGATCCTCCCTATAGTGAGACTTATTATTCATCCCGTATCCAGAATGATTAT TACCGAGGCTAGGGGGGGGTGCCCTATATCTGAAACAAATTACCCAACAGGTGAAGCCGG TGTGAATAGGGGACGACCGGCGGGGTATGCAGGCACAACAGCCTGTTCGGTCACCTTTTA CGACGGTGAGACACCTTTTTTCAGAGAACGCGAGTCTGGAGTCACACGGGAGAAGGGGAG CAAAAAAAGCAAAAACTGTGTACAAGCACAAGTTACGGGATTTCTCCGCATCGAAAAAAA TACCCCATTTGCACTCTTGCCGATGGGGTCGGAGCATTGAGAGAATAGTATAGTC |
| GenBank Accession | BX948946 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:2026036 - go to primer design |
| BLAST e Value | 4e-37 |
| Hit Clone Code (BAC ID) | T20G20 |
| Hit Gene Code | At2g05520 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | glycine-rich protein 3 |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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