SimpleSearch - Line and FST details
Line specific information
| Line ID | 795G03 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N476299) |
| Segregation Analysis | 50:50:34 |
| Confirmed for Hit | At3g57130 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At3g57130
| Sequence (A. th genome BLAST matches underlined) | >23-K025019-022-795-G03-8409 ATGAAGCCATTTACAATTGAATATCTCCCGGTTCTATCTTGGGACGCGCTTATGTGGTAT TCTTGACACTTGCACCCCTGTACTAGAATTGAAGTACAAGTAAGAAAACTTCGTAACCGA CTGAGTTAACCGGTATGACTCCTCCTACTGCGGCTGCTCTGGCTCCTGATCCGGTTTGGT TAGCGGGTTCAGCTCCGGGTTGCGAAGGATCAGATTCACAGAAGAATTTGCGGAACAAGA GGCTACGAGCAGCGAGGATGCAACGGTGATCGTGGACTATGGGATCCTCCCTATAGTGAG AGACATTTGCTGATCCAGATGCCAATTTAATGAACTGATACAGTATACATATAGCTATAG TACACCGTCTATCAAGCTTTTCCGGTCTTGCTGCCTATATTTGGGAGAGAATTGATATTA CATATCGTGCGGGATGGGGGCGGGAAGGATGAAAGATCTGC |
| GenBank Accession | BX949069 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:21148183 - go to primer design |
| BLAST e Value | 3e-102 |
| Hit Clone Code (BAC ID) | F24I3 |
| Hit Gene Code | At3g57130 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Ankyrin repeat family protein / BTB/POZ domain-containing protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At3g42580
| Sequence (A. th genome BLAST matches underlined) | >23-K024969-022-795-G03-8409 AATATATCCACGGACTTCCCACTTGGACTCCGACTCTTTGCCTTCGAAACTATCCCGTCT ATTGCTATGGGATCCTCCCTATAGTGAGACTTATTAATCCCCCCGTTATGCGGAGTTCGT GACTTCTTTAGTAGTTTGATCTGGGTATTGAAGTGGTTTGGGTACAATTCGCCTTTTTTC TCTTTTATATCGGGGGGGTACGTGTGTGACCGCATCCCAATGTACAGCTTTGAGTTCGAC ATGTACCGTATTCTTGGATCCTATGTACGAGAGATGGGTAACCAGAGAACGAAACAATAC ACATGCATTAGCGAAATTGTTGAAACTTCTTCGCAAAACTAAGACATAAATCAATTTACG GAATTGGAAAGACACTAATGCAAAAGAATTATACACAAAGACAGAGAATATATGCTAACC AGAGGGTGGGGATATTAAGAGATACATTTAAAATGGACTAGCGAGGAAAAGATAATGAAG TAGTAATAATGATAAAA |
| GenBank Accession | BX949068 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:14691829 - go to primer design |
| BLAST e Value | 3e-19 |
| Hit Clone Code (BAC ID) | T12K4 |
| Hit Gene Code | At3g42580 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | |
| Insertion Classification | TS2TE |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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