SimpleSearch - Line and FST details


Line specific information

 
Line ID 796F06
Vector Used pAC161
Line Availability available as T3 set from NASC (N476386)
Segregation Analysis 50:46:35
Confirmed for Hit At1g12000
Parent of DUPLO pair 12515
Parent of pair(s) none

Gene hit At1g12000

 
Sequence (A. th genome BLAST matches underlined) 
>46-K024950-022-796-F06-8409
ATTGAATATGGACAGCTTCTATGCTGTTTCTTCAGCTTGTTTAAACTGCACATGAGAGGC
ATATATAATTACTCACTGCACGAAATAGAGGCTTTGGAAGCAGTAACAAATATCTTTTCA
AACCACAAAAAAATATTCAACCTGGTCAGGTGTTTCAATCTTGTCTCTTCCACTGCAGAT
CATGTCAAAACCACCCTGTTGAGACCAAAAAAAGAATTATAACCACATCGACTTAAAAAG
ACAAGTATATTTAACCAAGGACTAATGCTCCACATCTATGGGATCCTCCCTATAGTGAGA
CTAAGGANTTTTNNTATAATATAAATATAAATTTATCCTATTTAAAATGAATAAACCCCC
AAACAATAATAATAGATCACAGACATAATCACATAGATATAACATGTAATTCACAAGTGT
TGGAAACAAAAACACAATTTATTTACATATAAAATGATAAAAAATCAATCTCACTAATCA
A
GenBank Accession BX949172 [GenBank]
Graphic View Graphic view of gene At1g12000
Predicted Position of Insertion Chr1:4052605 - go to primer design
BLAST e Value 1e-120
Hit Clone Code (BAC ID) F12F1
Hit Gene Code At1g12000 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Phosphofructokinase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX949172 [GenBank]


Last Updated on 10.06.2021 13:37