SimpleSearch - Line and FST details


Line specific information

 
Line ID 799C01
Vector Used pAC161
Line Availability available as T3 set from NASC (N476633)
Segregation Analysis 50:50:46
Confirmed for Hit At2g31200
Parent of DUPLO pair none
Parent of pair(s) 7715, 8757, 8758, 9363, 9364, 11011, 85499, 85507, 85513, 85520, 85521

Gene hit F14J22

 
Sequence (A. th genome BLAST matches underlined) 
>03-K024973-022-799-C01-8409
AATCACGATTACAATAGTTGAAAATTTATTCATGGATAAGAAAAAAAAAAGTTTAGTATA
AGGGGTTGGGAAAAATATTTGTTCACTCCCAAAAATGAAAAATGAGAAGCCAGAAACTAT
GGGATCCTCCCTATAGGGAGACCTATNACTCNGCGNNTTTACCTATATCTCTACTCACAT
AAACAANCTCAATACCTAAGGTATGAAAAACGAATACGGGAGGAAAGAGCGAGAATCGAA
GAAACAAAGAGTAAACCAGACAAGGAGAAAAAGCAACGCTGAATCAAGTGGAAGATAACC
TCCGAGATAAAGAGAGAAAAAGGAGACAAGAGAAAAAGTACAAAATAGACGAACCGCACC
AGAGATAGAAAATAAACGCAAACATAAAAAAAAGGAGAAGAAGAAGCAAAACAAGGAGAG
ATGCAGAAACAGAAAACAGTA
GenBank Accession BX949501 [GenBank]
Graphic View Graphic view of sequence BX949501 of line 799C01
Predicted Position of Insertion Chr1:18427068 - go to primer design
BLAST e Value 8e-29
Hit Clone Code (BAC ID) F14J22
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At2g31200

 
Sequence (A. th genome BLAST matches underlined) 
>03-K024952-022-799-C01-8409
CAACTTCTTTTGTGGAGACATCAATCATGAAGACCACATAGCGATGAGTTCTTTTCCTTT
GAAGCCCTATGCGAGCCCCCCTACATTGAGGCTTGTTACTCCGACCACTACCTATGGGAT
CCTCCCCATGGTGAGCAAAACACATATCTTAACAAAAGGTGTAGATTCAATTTTTAGTCC
ACACCCCAACGAGTTGACTGTCGCGAGGGGAACCACCCAATAGTGAGCCAAAGGAAGCGC
TGTGCCAGGATAAAAGCCACAAAGCTCCCACACACAAAAAGAAAGGAGACGAAATAAACA
TCACAGAGGGAAGACAAAAGGGGCCAACAGCAAAAGGACCGAAGAAAGACCACACACCAC
CACCAAAGAAGAAAACACATAAAAACCGAGCCCAAAACACACCACAAAGTAAGACTAACC
CTAACACACAAGGGAGGAACCGAATGCACCTGAACATTACACAAGCACCCAATACAGA
GenBank Accession FR815980 [GenBank]
Graphic View Graphic view of gene At2g31200
Predicted Position of Insertion Chr2:13294563 - go to primer design
BLAST e Value 7e-17
Hit Clone Code (BAC ID) F16D14
Hit Gene Code At2g31200 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation actin depolymerizing factor 6
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37