SimpleSearch - Line and FST details


Line specific information

 
Line ID 800B03
Vector Used pAC161
Line Availability available as T3 set from NASC (N476719)
Segregation Analysis 50:49:48
Confirmed for Hit At1g64295 At2g33170
Parent of DUPLO pair none
Parent of pair(s) 11784

Gene hit At1g64295

 
Sequence (A. th genome BLAST matches underlined) 
>18-K025200-022-800-B03-8409
TCGCCTGTTATGACTCGGAATCTCATAACTTTTGCGTGCGAAGTTTTTGATTCCGATTCG
TTTATGTGGAAGAGATTAAAAAATTTGCGTCTACCGAGAACAGACGGTCTAATTCTTTCA
AACCCGGTACAAGCTTCAGGGTTCTTGCATTGGAGATCATGGAACCACAATGTGATCCGG
TTATGTCCCAAAACCGAAACTTGGTCTTTCTTACATACTCCAAACGTTGGTTTATTCCCA
GAGTTAGTCAACTACGAAAGAAAACTATGGGATCCTCC
GenBank Accession CR359814 [GenBank]
Graphic View Graphic view of gene At1g64295
Predicted Position of Insertion Chr1:23860257 - go to primer design
BLAST e Value 7e-137
Hit Clone Code (BAC ID) F15H21
Hit Gene Code At1g64295 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation F-box associated ubiquitination effector family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR359815 [GenBank] CR359814 [GenBank]

Gene hit At2g33170

 
Sequence (A. th genome BLAST matches underlined) 
>18-K025367-022-800-B03-8409
AGCCATTTACATTGAAATGTCCGCGCGTTGACCCTCAGACTATGTGATTTCCCGGCGTGA
AGTAACTCGCCCAGGCTTCCCCGAGACATGTATTCGTAGAGCAAGAGGTTCGAGTTTGAT
CCTTGGTGGTAACAGAAACTGTATAGCCTGACAATGTTCCTGTGACGGATTTTGCCTATG
GGATCCTCCCTATAGTGAGACCCTAGGGTCCTCCCTATTTCTATCCATCTTTCTTCTATC
TCCTCTTCTTGCCCCCAATTATGATTTGATTGAAAAAAGGCCTTTGTGACTACCCAACAA
ATTACGATCCGTCGTATTTATATGCGAAAGCAATAAACAAATTATTCTAATTCGGAAATC
TTTATTTCGACGTGTCGACTTTCACGACCAAATGGGGGCTTAAATGATAAACTTCGGGAT
CGATGCCTTGATTTCTCCTTTCCCA
GenBank Accession CR359816 [GenBank]
Graphic View Graphic view of gene At2g33170
Predicted Position of Insertion Chr2:14057068 - go to primer design
BLAST e Value 3e-68
Hit Clone Code (BAC ID) F25I18
Hit Gene Code At2g33170 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Leucine-rich repeat receptor-like protein kinase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37