SimpleSearch - Line and FST details


Line specific information

 
Line ID 804C07
Vector Used pAC106
Line Availability available as T3 set from NASC (N477119)
Segregation Analysis 50:40:29
Confirmed for Hit At1g58340
Parent of DUPLO pair none
Parent of pair(s) 5098, 5125, 5138, 7483, 8619

Gene hit At1g58340

 
Sequence (A. th genome BLAST matches underlined) 
>51-K023442-022-804-C07-8409
GCCATTTACATGGTGCCTAACCAGCACAGCAAACACCATCGCCATTAGGCCTAAGGCGAT
CGCGCAGAAGAGTGAGATGATCATGGATACCCGAGCTTTCGCCGGACGTTTAGCCCCAAG
CTCGTTGCTAATTCTTGTAAAGACACCAAGGCTGAGAGAGGATGGGAAGACGTAGACCAA
AGCCGTCGNTTGGATCAAGAGTCGCATGGA
GenBank Accession BX949892 [GenBank]
Graphic View Graphic view of gene At1g58340
Predicted Position of Insertion Chr1:21654676 - go to primer design
BLAST e Value 5e-101
Hit Clone Code (BAC ID) F19C14
Hit Gene Code At1g58340 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation MATE efflux family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR816035 [GenBank]


Last Updated on 10.06.2021 13:37