SimpleSearch - Line and FST details


Line specific information

 
Line ID 807E01
Vector Used pAC106
Line Availability available as T3 set from NASC (N477425)
Segregation Analysis 50:17:8
Confirmed for Hit At3g43430
Parent of DUPLO pair 1271
Parent of pair(s) none

Gene hit At3g43430

 
Sequence (A. th genome BLAST matches underlined) 
>05-K025560-022-807-E01-8409
GACAGAAGCCATTTACATTGAATGATGATAGATGGAAGCAACGAGCGTTCGACATAGGGG
ACAAGTACCGGTGGTTATCATCATCACCGCCGCAACATTCATAATCTAGCCATCGGTCAA
TACAGTCACGATGAAACACGTGAGTACAGTTCCTAAGCTCTCTGATTTCGTCCTCGTCTT
CAAGATCTCCTATGGGATCCTCCCTATAGTGAGTCGTGGGGATCGCCCCTTTAAACATCA
TTCTCGATAGAGTGGATTATGAGATGTAAACGTTAATGAATTGATAAACACGTATTTAAG
ACTAATATGGCAGTCACCAATTGAATATTGTGAGCGCCTTAGGATTTAAAGAAAGATCTG
TGGATTTGTAAGAAGATCAATACGGTGGGATAGTAAGGATGAGATGCAGAGGGTCAAGCG
AATACCATCAGATAGGTGGGATAGGCTCCAAATTGTTCTGGATGAATCTAGTAACTCGAC
ATGTATCCCTGGAGCTGGTAGAGG
GenBank Accession CR398677 [GenBank]
Graphic View Graphic view of gene At3g43430
Predicted Position of Insertion Chr3:15354842 - go to primer design
BLAST e Value 2e-75
Hit Clone Code (BAC ID) T5C2
Hit Gene Code At3g43430 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation RING/U-box superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR360013 [GenBank]


Last Updated on 10.06.2021 13:37