SimpleSearch - Line and FST details


Line specific information

 
Line ID 811F03
Vector Used pAC106
Line Availability available as T3 set from NASC (N477823)
Segregation Analysis 50:36:33
Confirmed for Hit At5g63930
Parent of DUPLO pair none
Parent of pair(s) 3132, 3273

Gene hit F3L12

 
Sequence (A. th genome BLAST matches underlined) 
>22-K025562-022-811-F03-8409
AGCCATTTAAATGACCTATCACCATGACAACAACGAAACAGTGGCTCACGATCTCTTTCT
TTTAATGAACGAATGACATCAACAGCACTATGGGATCCTCCCTATAGTGAGA
GenBank Accession CR398794 [GenBank]
Graphic View Graphic view of sequence CR398794 of line 811F03
Predicted Position of Insertion Chr2:1303147 - go to primer design
BLAST e Value 9e-38
Hit Clone Code (BAC ID) F3L12
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At5g63930

 
Sequence (A. th genome BLAST matches underlined) 
>22-K025224-022-811-F03-8409
GCCGCATGAGAGAGACCCCGCCAATCACAGCTGCAGTAATGGCTATGATTTTACTCGAAC
GCATTCCTCCGGGCTTCCCGGTTGACTGAGAAGGCGCGAAAGGCTGTGTTTGGATACACT
GGTTGAGCGGCGGGCCGCAAAGCCCTTCATTACCGATGAAGCTATGGGATCCTCCCTATA
GTGAGACCTATTACTCCCCCCTATACTGGGAATTGGTAACTCAGTGTCTCATCCAGTATC
TCTAATTTGATAGATTAATAATCCCT
GenBank Accession CR360429 [GenBank]
Graphic View Graphic view of gene At5g63930
Predicted Position of Insertion Chr5:25585347 - go to primer design
BLAST e Value 4e-86
Hit Clone Code (BAC ID) MBM17
Hit Gene Code At5g63930 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Leucine-rich repeat protein kinase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37