SimpleSearch - Line and FST details


Line specific information

 
Line ID 814G03
Vector Used pAC106
Line Availability available as T3 set from NASC (N397508)
Segregation Analysis 42:6:2
Confirmed for Hit At1g76550
Parent of DUPLO pair none
Parent of pair(s) none
Note

Gene hit At1g76550

 
Sequence (A. th genome BLAST matches underlined) 
>23-K025604-022-814-G03-8409
GAGTGAGATGTTACACCTAACAAATAAAAACATTGATTTAGAAAATTCTGGGATGAACTT
AAAAAATCATATTTACACAAGTTAAGAACAAAACATCTACTAAAACAGACACCCGAAAAA
GAGGAAAAGTAGGTATGGGATCCTCCCTATAGTGAG
GenBank Accession CR399066 [GenBank]
Graphic View Graphic view of gene At1g76550
Predicted Position of Insertion Chr1:28725425 - go to primer design
BLAST e Value 5e-67
Hit Clone Code (BAC ID) F14G6
Hit Gene Code At1g76550 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Phosphofructokinase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At2g28400

 
Sequence (A. th genome BLAST matches underlined) 
>23-K025642-022-814-G03-8409
GAGTTTGAGGAAATGCCCTTGGAAATTTCGTATAAGTTTGCGATTTTATCCAAACGAAAC
GATGACTGTCAAGGGCTCTACACGGCAACCGATTAAAAGGTTATTTTATTTTAACTTGTG
GTTTATTCAATTATTAACTACGCTGTGAATATTTGAATCATGTGTTAAAGAAGAGAACGC
AATTTATTATATTTCTTCGAAATTTCGTAGGAAGATGAATTGGAAAACAATAATAACTCT
TACATGGATGGAATTTATTAACAAACCAGATTTTTTTTTTCTCAAACACCGTTTTCCTCC
TTTGACAAGGGTATTAGTTATAAAGTATTAGTATAATCTAAGCAAGCATACCGGATCCGA
TTTCATAAAAAATAAATTTAGTATGGGATCCTCCCTATAGTGAG
GenBank Accession CR399067 [GenBank]
Graphic View Graphic view of gene At2g28400
Predicted Position of Insertion Chr2:12149128 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T1B3
Hit Gene Code At2g28400 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation senescence regulator (Protein of unknown function, DUF584)
Insertion Classification Promoter
Confirmation Status failed, line belongs to a contamination group, please check line 814G02


Last Updated on 10.06.2021 13:37