SimpleSearch - Line and FST details
Line specific information
| Line ID | 817A02 |
| Vector Used | pAC106 |
| Line Availability | available as T3 set from NASC (N478338) |
| Segregation Analysis | 50:25:22 |
| Confirmed for Hit | At2g02450 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At2g02450
| Sequence (A. th genome BLAST matches underlined) | >09-K025722-022-817-A02-8409 ATCTGAGGCTTGTAGACATATTATTTCCATGGAAACCTGACCCTTGTGCGCCTTCCCCCC AACACGGTGAGCGACGGGGCAACGGAGTGATCCACATGGGACTTTTAAACATCATCCGTC GGATGGCGTTGCGAGAGAAGCAGTCGATCCGTGAGATCAGCCGACGCACCGGGCAGGCGC GCAACACGATCGCAAAGTATTTGAACGCAGGTATGGGATCCTCCCTATAGTGAGAATCCT CCACAACAAGCATCATTCCCATGAGTAACCAAGTCAACAATAACGAACAAGGTATAGAAG ACAATGATCATAGAGGCGGCCAAGAGAGTCATGTCCAAAATGAAGATGAAGCTGATGATC ATGATCATGACATGGTCATGCCCGGATTTAAATTCCATCCTACCGAAGAAGAACTCCAAG AGTTTTACCCTTCCCGAAAAGTTGAAGGCAACCGCTTTAATGTA |
| GenBank Accession | CR399335 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:647768 - go to primer design |
| BLAST e Value | 1e-107 |
| Hit Clone Code (BAC ID) | T16F16 |
| Hit Gene Code | At2g02450 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | NAC domain containing protein 35 |
| Insertion Classification | TS2TE (5') |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At1g30130
| Sequence (A. th genome BLAST matches underlined) | >09-K025709-022-817-A02-8409 TTTTCTTGATTTATAACACTTTAAAACTGAAGCATTAGAGTCTATAATAACAATTGTAAA TCTACTCCTTGTGTTAATACCCTACCGTTAAACGTGGCATTAAATCATAAATATACCACA CCTCTGCATTTGAAGGGTCATCCATGTCAATCTCTGATTTTTGAAAAAGACCATATAGAG ATACAGACACCGAGGTAGAGATATGGACTTGCTCTTTCTCCTCTGTTCAATCATCTACAC TTCAATCACTTCCATCTTCTTCTCTCTTCTCCTCCCGTTTCGCTTCCTTCTCCACCGTCT CCTTCCTTCACGCGCCGCCGTCGATCCTAATGTCTCTTTCTACGAAGGCACAGTCTGGCA CGACCGTCTCCGTCCTGTCCGCCACTCTTTCCGTTATTCCGTTCGTTACGCACTCTTTGA CCTCGACAAAGCTATTAACACACCGCCGGATCATTTCTCCGCCGACGAAGC |
| GenBank Accession | CR399334 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:10587444 - go to primer design |
| BLAST e Value | 1e-86 |
| Hit Clone Code (BAC ID) | T2H7 |
| Hit Gene Code | At1g30130 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | DUF1365 family protein |
| Insertion Classification | Promoter |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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