SimpleSearch - Line and FST details


Line specific information

 
Line ID 819D07
Vector Used pAC106
Line Availability available as T3 set from NASC (N478571)
Segregation Analysis 50:12:10
Confirmed for Hit At5g61560
Parent of DUPLO pair none
Parent of pair(s) 8308, 9849

Gene hit At5g61560

 
Sequence (A. th genome BLAST matches underlined) 
>52-K025639-022-819-D07-8409
CCATTTACATTGAATATAATGGGGCTTGAATCAGACGATATAGCTGATGCTATCTCTACC
GCAGTTCACCATCATGGAAATAATGACCTAGTCATTGAACCTTCCACTTCAATCATCTTC
TATTGGAAAAATTTAAAACACTCTCTCTTACCTTTACATTTCCATCATATTGTTAAATCT
TTTTCCTTTAGTAGGAAGTTGAATAAAAACTACTTGTCTTCAAGAATTGCATATGCTACA
CCAAGATTTTGCTCATTTCATGTTATCTCTAAAGGAAAGCTTCTCAATGTTCGAATATCC
AATATGGACACCTAAACGAGCATTGCAGACGATAGAAACGAAAGCCGGTTCTCTTCAGAT
AGCCATTCAGGTAAAAACTTACTCTGCAGTATGGAATCCTCCCTATATTGAGACATACTC
TAAAGATACAAGATCTTGTTAACCAATTGAACGACTATGATCAATCATCAAAGTTGAATA
TAGAGTACGGCATCCTCCCTATATGGAGCTAACATGTAAAAGGAGCATCC
GenBank Accession CR399578 [GenBank]
Graphic View Graphic view of gene At5g61560
Predicted Position of Insertion Chr5:24753899 - go to primer design
BLAST e Value 4e-135
Hit Clone Code (BAC ID) K11J9
Hit Gene Code At5g61560 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation U-box domain-containing protein kinase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR399578 [GenBank]


Last Updated on 10.06.2021 13:37