SimpleSearch - Line and FST details


Line specific information

 
Line ID 821A05
Vector Used pAC106
Line Availability available as T3 set from NASC (N478725)
Segregation Analysis 50:20:19
Confirmed for Hit At5g45080
Parent of DUPLO pair none
Parent of pair(s) 9492

Gene hit At5g45080

 
Sequence (A. th genome BLAST matches underlined) 
>33-K025531-022-821-A05-8409
CATGAGCATTTACATTGAATATAGCCATTTACTTAGTAGTTTTCGTATGGGATCCTCCCT
ATAGTGAGACNCANAACNACCCCCAAAAAGAAAAAACAAACTATCAACTGGGAATCTATA
CCCCAATAACTATGAACCTGTTAATTCATACTTTAGCAGACCATAAAAATGCCGAAAGGT
CACACATAACACACCAATGCCACCTTCCGTATCTGATCCATAGATTTGATTTTCCTTGTC
CAAAATACTGAAAACCAGCTAAAGGCGACATTCTAACCATGCCAACTGAAAGGGACCCCA
AGTCCGTATGGGATCCTCCCTATAGTCGAGATGANACGGCCTTGATCCTTGCGTTCCTTG
ATCTTGGCCAGCTCATTCAAGCACCTATGCGATCTTGTGAAATCCACGGAAAATATCACG
AGCGCGAGCTCAGACTCTTCAATCCTCGTCAAAAGGTTAGCCATTTCTGAGCCCAAAAAC
TCGGTCTCGTCTATGAAGACGT
GenBank Accession CR360527 [GenBank]
Graphic View Graphic view of gene At5g45080
Predicted Position of Insertion Chr5:18192616 - go to primer design
BLAST e Value 2e-81
Hit Clone Code (BAC ID) K17O22
Hit Gene Code At5g45080 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation phloem protein 2-A6
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37