SimpleSearch - Line and FST details


Line specific information

 
Line ID 821H10
Vector Used pAC106
Line Availability available as T3 set from NASC (N478814)
Segregation Analysis 50:49:48
Confirmed for Hit At2g37840
Parent of DUPLO pair 2282
Parent of pair(s) none

Gene hit At4g33210

 
Sequence (A. th genome BLAST matches underlined) 
>80-K025506-022-821-H10-8409
GAAGCCATTTACATTGAATATATCCTGGATCCAAAATGGAATGTACTGAAGATTAATGAT
TGAGCATTTTGCATTTGCTGTAGAAATTACATTCTTTTAACTACCAGGACAAGACTGGTC
TTATACGATTGGCAGTTCCCTTTCGAATGGTCCAGCAGCTGCCGGTCTCTGGAAATAATG
AATCTCGACCGCCCAATATTAGCTAGGACGCTTTCTACACCTACCTTTTTGCGCCGTAAC
TTTTACCACTAAACACACTTTGGTATGGGATCCTCCCTATAGTGAG
GenBank Accession CR360618 [GenBank]
Graphic View Graphic view of gene At4g33210
Predicted Position of Insertion Chr4:16016530 - go to primer design
BLAST e Value 1e-11
Hit Clone Code (BAC ID) F4I10
Hit Gene Code At4g33210 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation F-box family protein
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At2g37840

 
Sequence (A. th genome BLAST matches underlined) 
>80-K025531-022-821-H10-8409
AGCCATTTACAATTGAACATATCCTCGAGATATGATCTCAGAGATGAGACTTTCCTGCAG
CTTCTTGATAAGCCTGTCCATGGCGATCTCTTTGATAGCAACCTCAATATGGGATCCTCC
CTATAGTGAGTACCCCATTGTATGTTTCACCTGTTTCCTGCCTATTGACAATTTTATGGT
ATACTGCCATGAATTTGCCGGACATTTTTGAATCCTATCTATGTAATTAAGCTTCTTTTG
TGGAACAAAATTTGGGTCTAGTTTGATGTTGTTCTGATTTGGGCAATGTGATGCAGTCTC
CTGGGAAAGTATGGGATCCTCCCTAAAGTGAGNNNNNAGNNNGNNNAGGNNGATGGGAAG
AAAGGAGGGAGAGAAGAAGGAGAAGGAAGGAAGAAAAAAAAAAAAAAAGAGAGGGGGGGG
GAAAGTAAANTATGTTTTATATTATGTAAAAG
GenBank Accession CR360619 [GenBank]
Graphic View Graphic view of gene At2g37840
Predicted Position of Insertion Chr2:15852202 - go to primer design
BLAST e Value 1e-39
Hit Clone Code (BAC ID) T8P21
Hit Gene Code At2g37840 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Protein kinase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR360619 [GenBank]


Last Updated on 10.06.2021 13:37