SimpleSearch - Line and FST details


Line specific information

 
Line ID 822A09
Vector Used pAC106
Line Availability available as T3 set from NASC (N478825)
Segregation Analysis 50:34:20
Confirmed for Hit At2g42090
Parent of DUPLO pair none
Parent of pair(s) 5362, 10303, 86123, 86133, 86142, 86148, 86151, 86154, 86160, 86162

Gene hit At2g42090

 
Sequence (A. th genome BLAST matches underlined) 
>65-K025507-022-822-A09-8409
NNNTTCGTAGGAATTCCGGACATGAGCCTTTACAATTGAATATATCCTGCCGCCGCTGCC
GCTTTGCACCCGGAGGAGCTAGCATGTTGATTTCCACCCAAAACTGATCCAGTTAGGCCC
ATTACTTCCAGTGACAACGGACCCATGTGCACCTTCCCCCCAACACGATGAGCGACGGGA
CACCGGAGTGATCCACATGGGACTTTTAGACATCAGCCGTCTGATGGCGGTACCAGAGAA
ACAGGTCGATCCTTGATATCAACCAACCCACCGGGGATGCGCGCACCACTATCGCGAAGT
ATTTGAAAGCAGGTATGGGATCCTCCGTATCGTGAGAGGGAGAAGAAGGTCATGCCAACA
GAGATATTCTCACACTTAAAGACCCAATGGAGCATGGTATCGTTAACAATTGGGATGACA
TGGAGAAGATTTGGCACTATACTTTCTACAACGAGCTACGTGTGGATCCTGAAGAACACC
CTGTATGGGATCCTCCCTATAGTGAG
GenBank Accession CR360633 [GenBank]
Graphic View Graphic view of gene At2g42090
Predicted Position of Insertion Chr2:17557051 - go to primer design
BLAST e Value 2e-78
Hit Clone Code (BAC ID) T6D20
Hit Gene Code At2g42090 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation actin 9
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR360633 [GenBank]


Last Updated on 10.06.2021 13:37