SimpleSearch - Line and FST details


Line specific information

 
Line ID 828E11
Vector Used pAC106
Line Availability available as T3 set from NASC (N479451)
Segregation Analysis 50:38:27
Confirmed for Hit At5g09590
Parent of DUPLO pair none
Parent of pair(s) 3464, 3505, 3577, 94882, 94900, 94906, 94931

Gene hit At5g09590

 
Sequence (A. th genome BLAST matches underlined) 
>85-K025721-022-828-E11-8409
CATTTACAATTGAATATATCCTGAGTACATACGACAAATTACGATCCGTGCGACAATTTC
CCCGGGTATGGGATCCTCCCTATAGTGAGAATGCAGATAATTTCCCTTGAGAAATGAGAC
ATGTGCACCTTCTCCCCAACACGGTGAGAGACAGGGCAACGCAGTGATCCACATGGGACT
TTTAAACATCATCCCTCGGATGTGGTTGCGAGAGAAACACTCGATCCGTGAGATATGCCG
ACACACCGGGCAGGCGCGCAACACAATCGCAAAGTATATGAACACACGTATGGGATCCTC
CCTATATTGAGAGATTCTCNANNCCTCTGCAAANCAANTCTGTCTTTGNCTANGTCTATT
CCCTCANTGNTCTTGAACTCATTAACCAAAAANTCTAACAAANNATTGTCNAAATCCTCA
CCTCCCAAAAANNTATCACCATTNNTNNCTTTCACCTAANAAAACCAATTTAATAAAAAA
AACAATTCTC
GenBank Accession CR399885 [GenBank]
Graphic View Graphic view of gene At5g09590
Predicted Position of Insertion Chr5:2977391 - go to primer design
BLAST e Value 5e-33
Hit Clone Code (BAC ID) F17I14
Hit Gene Code At5g09590 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation mitochondrial HSO70 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37