SimpleSearch - Line and FST details
Line specific information
| Line ID | 829B05 |
| Vector Used | pAC106 |
| Line Availability | available as T3 set from NASC (N479505) |
| Segregation Analysis | 50:7:6 |
| Confirmed for Hit | At3g47340 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 66197, 96025 |
Gene hit At3g47340
| Sequence (A. th genome BLAST matches underlined) | >34-K025707-022-829-B05-8409 GTTAATTCGGCAAGAANCATTTACAATTGAATATATCCTGTGTAAGATGAATTGAGCACG AATAGGTGGGAATTGAGTCTTGTATTGGGTAAGAGTTAATACCTGCAATATGGTAGCCTC GCTATACTGAGGAACATCCTAACACGGCAAGTATTCCACACATGTTTTTTTTTTGAAGAA AGTGAAAAAAATCCCTGAAAAATGACAACGAAAAAACGGAATTTTCAGAAACTTTAGGGA ATAAATATTGTAAAACCCCAAAAAAAAATTAGAAAAAGTTGTATAAATACCAATAATGTC CCGGAAAAAAAAGGAAAAAATTGAACTTAAAACCGTATGGAATCCTCCCTATAGAGAGAT ATCTTACCATGTTCTTTATAAGCATCTTCTAAAGTATGTTATCTTCCATATATATAGATC CCCAACACAAAACTGGGGTGAAAAGAAAAAACTCACTAATCCTAGAATCATTTAAAAACA AATCATCTATATTCATACATAAAAAAAAAATTAATGAAAGTTTAACATAATTATCAATAA AAGCATATAAATATAAA |
| GenBank Accession | CR399941 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:17440930 - go to primer design |
| BLAST e Value | 2e-10 |
| Hit Clone Code (BAC ID) | T21L8 |
| Hit Gene Code | At3g47340 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | glutamine-dependent asparagine synthase 1 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit T32E8
| Sequence (A. th genome BLAST matches underlined) | >34-K025744-022-829-B05-8409 CACTTACACTTGAAATATACCGTATAAATTAATTGATGACACAGATGGTGGGATTCCAGA TATTGTAATGCGTAAGATTGAATTCCTGCCATATGGAATCCCCCCTATACATGAGGAACA TCCTTAACCTGCCGCGTATTCCAAAGAGTGTATTTTTTTTCATAAAGGTGCAAATGATCC CTGAAAAATGTCATCCCACAGACGGAATTTGCCGAAACTTTGTCGAACCTTTATTGTAAA CCCCCACACTGACATTAGCCAAAGTTGTATATACACCTATTTCGTCCCGGAAAACAAAGT TTCATTTTGCACTTAAAGTTTTTTGGCCTCCTCCTTATATAGAGATATTTTAAAATGTTC TTTTGATGCCTCTTCTAGTGTATGGGATCCTCCCTATAGTGAG |
| GenBank Accession | CR399942 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:29243884 - go to primer design |
| BLAST e Value | 2e-10 |
| Hit Clone Code (BAC ID) | T32E8 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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