SimpleSearch - Line and FST details


Line specific information

 
Line ID 832B07
Vector Used pAC106
Line Availability available as T3 set from NASC (N479795)
Segregation Analysis 50:32:30
Confirmed for Hit At5g55950
Parent of DUPLO pair none
Parent of pair(s) 9527

Gene hit At5g15830

 
Sequence (A. th genome BLAST matches underlined) 
>50-K025704-022-832-B07-8409
ATCATATTCACATAAATTATATATGGATGTGTATATATGATGACACGTGAAGGTGCTACT
TCATTATAGGATTATTTTAACAACCAAGTGGTGGCATCTTGTCGCGTATGGGATCCTCCC
TATAGTGAGCNCTNTAATGATCCCCCTTAAATCTTTATCCCTCATCCGTCTTATGCTGAC
ACGAAACAACAACTCCATCCGTTTCTTCTATCCAAAATTAATCCAAGGCTCCCCCCACTT
TCCAATCACTATTTGACTCCTTTCTTAAATTTCACTCTCTCTAGATTCCACCCACATATT
CTAAATCCTTAATAACCCTCTCTTCCATCTAAAACTTAACATTTTCCCTTCCTTTCATAA
TCCCTTCTTACTTTCTTCTATATTCACTCAATCCTCCATTTTATACTTTAAATCAATTAC
TTATATTTTATCTACAAATATACCATACCTACTTGTTCTTTCACTACAATTTCCAATCAT
TATTTCTACTTTTCTCTTTATCCAAATTTCATCCCCTAATACATTACTTACTTCTTATCT
TGCTAACATTACCTTTCTTCTTT
GenBank Accession CR400259 [GenBank]
Graphic View Graphic view of gene At5g15830
Predicted Position of Insertion Chr5:5168126 - go to primer design
BLAST e Value 1e-49
Hit Clone Code (BAC ID) F14F8
Hit Gene Code At5g15830 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation basic leucine-zipper 3
Insertion Classification Promoter
Confirmation Status unknown

Gene hit At5g55950

 
Sequence (A. th genome BLAST matches underlined) 
>50-K025747-022-832-B07-8409
GCATCCTCCCTATAGTGAGATATGAATGTGTATATATGATGACACGTGAAGGTGCTACTT
CTTTATAGAATTATTTTAACAACCAAGTGGTGGCATCTTGTCTTGTATGGGATCCTCCCT
ATAGTGAGAACGGAGTGATCCACATGGGACTTTTAAACATCATCCGTCGGATGGCGTTGC
GAGAGAAGCAGTCCATCCGTGAGATCAGCCGACGCACCGGGCAGGCGCGCAACACGATCG
CAAAGTATTTGAACGCAGGTATGGGATCCTCCCTATAGTGAGANGACNNATTGCNNAANC
NAAGTAAGCACCAAAAACATGTAATGAATTCTTGATTGTTTTGTTGACATGTCATAAAAG
ATATAAACGAAACCTTTGTGGAAGAAATGGTTGGCGGGGGGAGAACAAACTCGGCTAGAA
CAATCGTTGGGGCAACTGCCATCTTAGCCATTTGATAAAATCCAACGCTGGAAACAAAGA
AAAACAAAAGCTTTCAA
GenBank Accession CR400260 [GenBank]
Graphic View Graphic view of gene At5g55950
Predicted Position of Insertion Chr5:22658978 - go to primer design
BLAST e Value 2e-75
Hit Clone Code (BAC ID) MYN21
Hit Gene Code At5g55950 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Nucleotide/sugar transporter family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37