SimpleSearch - Line and FST details


Line specific information

 
Line ID 835B03
Vector Used pAC106
Line Availability available as T3 set from NASC (N480079)
Segregation Analysis 50:41:32
Confirmed for Hit At5g43100
Parent of DUPLO pair 2411
Parent of pair(s) none

Gene hit At5g43100

 
Sequence (A. th genome BLAST matches underlined) 
>18-K025700-022-835-B03-8409
GNAGCCATTTACAATTGAATAATCCTGCCGCCTGCTGCCGCTTTGCACCTGGTGGAACAT
GCACGTAGTTGTTCGAGGCGGAACTGACCCGGATATGCATATAAGTTCCATTGAGAACTG
ACCCATGTGCACCTTCCCCCCAACACGGTGAGCGACGGGACAACGGATTGATCCACATGG
GACTTTTAAACATCATCCGTCAGATGGCGTTGCGAGACAATCAGTCGATCCGTGAGATCA
CCCCACCCACCGGCCAAGAGCCCCACACGATCCCCAAGTATTTGAACGCAAGTATGGTAT
CCTCCCTATAGAGAGTGAAACCCCAGAACACAGGAAACAAGATTCCTCAAATTAAAAACA
CTTTTGATTTCAAGTAAATTGATGTAGTTATTACGCTATTTTGATGTATGGGATCCTCCC
TATAGTGAG
GenBank Accession CR400361 [GenBank]
Graphic View Graphic view of gene At5g43100
Predicted Position of Insertion Chr5:17302518 - go to primer design
BLAST e Value 1e-45
Hit Clone Code (BAC ID) MMG4
Hit Gene Code At5g43100 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Eukaryotic aspartyl protease family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37