SimpleSearch - Line and FST details


Line specific information

 
Line ID 836B11
Vector Used pAC106
Line Availability available as T3 set from NASC (N480183)
Segregation Analysis 50:42:30
Confirmed for Hit At1g16890
Parent of DUPLO pair none
Parent of pair(s) 80836, 80853, 80856

Gene hit At1g16890

 
Sequence (A. th genome BLAST matches underlined) 
>82-K025701-022-836-B11-8409
AGCCATTTAAATTGAGTATATCCGTGCCGCCGCGGCCGCTTTTGGACCCGGCGGTAATTC
TGTATGACGACTATCCGAACATGATGAATCTATGAGACCTAGTGGTACGGTAGCCACCCG
ATCCTGGGGCACCTTCCCCCCAACACGGTGAGCGACGGGGCAACGGAGTGATCCACATGG
GACTTTTAAACATCATCCGTCGGATGGCGTTGCGAGAGAAGCAGTCGATCCGTGAGATCA
GCCGACGCACCGGGCAGGCGCGCAACACGATCGCAAAGTATTTGAACGCAGGTATGGGAT
CCTCCCTATAGTGAGANNNNNNNNNNNNNNTNTNNNNNNNNTNCTATGGGATCCTCCCTA
TANTGAGTTTCTGACAATCCATCTATATATGGGAACTCAAATAGATAGTACTATTGCTTA
TTTGATG
GenBank Accession CR400488 [GenBank]
Graphic View Graphic view of gene At1g16890
Predicted Position of Insertion Chr1:5777616 - go to primer design
BLAST e Value 2e-04
Hit Clone Code (BAC ID) F17F16
Hit Gene Code At1g16890 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ubiquitin-conjugating enzyme 36
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit CR400488 [GenBank]


Last Updated on 10.06.2021 13:37