SimpleSearch - Line and FST details


Line specific information

 
Line ID 846C06
Vector Used pAC106
Line Availability available as T3 set from NASC (N481150)
Segregation Analysis 50:47:35
Confirmed for Hit At5g06980
Parent of DUPLO pair 11903
Parent of pair(s) none

Gene hit At5g06980

 
Sequence (A. th genome BLAST matches underlined) 
>43-K025831-022-846-C06-8409
NNNNGGCATGTATTCGGAAATGNAGCCATTTACAATTGAAGCCATATCCATCTCCATCTG
ACTGTATAATCCTCCACTGAAACCATTGTGAATCACATCATAATCAAAACATTTCTCAGC
AGCTTCTGAAGAGTTCATGCTCCATCCGGTATGGGATCCTCCCTATAGTGAGANNNATGG
NATCCTCCCTATANTGAGTCTTATTACCCANTGGNCTACACTGAATTGGTGGCTCAAGGT
AATGCTTATGTCATACCTTAACTTTCATTTTATAATAACGCTGCGGACATGTATGGGATC
CTCCCTATAGTGAGGAAGTCTATGTACGGGTCCCTAGACTAAATTTAGTGTTTAATATTT
GAAAGAATGGATGTAATAAGAGATATATGAGCTGCTAGATGCTTAAAGAGATGTAGCGTA
GTATTTTTAGTGGAAAGGTAGAGGAATTATTAGAGAGGGAATTATAATAAGGTATGTTTA
TGTGGACTACGATAAACGGGTAGATAAATAAAATAAAAGG
GenBank Accession CR401485 [GenBank]
Graphic View Graphic view of gene At5g06980
Predicted Position of Insertion Chr5:2168000 - go to primer design
BLAST e Value 3e-53
Hit Clone Code (BAC ID) MOJ9
Hit Gene Code At5g06980 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37