SimpleSearch - Line and FST details


Line specific information

 
Line ID 850G03
Vector Used pAC161
Line Availability available as T3 set from NASC (N481579)
Segregation Analysis 50:43:8
Confirmed for Hit At2g16430
Parent of DUPLO pair none
Parent of pair(s) 4004, 4201, 4238, 9911, 91258, 91266
Note

Gene hit At2g16430

 
Sequence (A. th genome BLAST matches underlined) 
>23-K025839-022-850-G03-8409
ACCATTTACAATTGAATATATGCTGATGTGTTTGAACGCGAGTACGGGATGAACAATAGG
TTAGATATGTTAGCAACCATAAGTAAAGGAGGCATCGTGACCCAAAAGTTATTGATCTTA
CCGATCTTTCGTAGGCGTGGACATGACCTGCAAAAACTACATCTACTTTGTATGGGATCC
TCCCTATAGTGAGACNNCTCCNGNCCNNNCGNGGGGGGGATCCATATTANATATCCCAAT
ACCNCCNTTCCATCCTCAATACTCTATTTTTATCATTTNACCGCAAGTAAGAGATCATCC
CTCTAAGGAGCCAATACGGAGTTCCAATATATAACGAATCCTATGCGACTGGCCAAATAA
GGGTACTCAATTTCAAAATTGACCGCCCAACCCATAGACTCTCAGGTAAAGGTGGGGGGG
GGAGGCCATAGAATACGCGGGGGGGGGGGGGGGGGGGGGAGAAAAAAATTATATTATCTC
AAAAGCCTATTATTATTCTTTATCTACTTTA
GenBank Accession CR401940 [GenBank]
Graphic View Graphic view of gene At2g16430
Predicted Position of Insertion Chr2:7120901 - go to primer design
BLAST e Value 8e-38
Hit Clone Code (BAC ID) F16F14
Hit Gene Code At2g16430 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation purple acid phosphatase 10
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g22210

 
Sequence (A. th genome BLAST matches underlined) 
>23-K025840-022-850-G03-8409
CTCCCTGTAGAGAGACTGAGCCTCAGCCTAGGTATGGGATCCTCCCTATAGTGAGAGAAA
GTCTGGCTCACTTGCTCAACTAATGCCACCCATCCCTGACGAACTCGAGCGTGATTATGT
CATTCCGTATGGGATCCTCCCTATAGTGAGGCGNNNTNNTNN
GenBank Accession CR401941 [GenBank]
Graphic View Graphic view of gene At1g22210
Predicted Position of Insertion Chr1:7843213 - go to primer design
BLAST e Value 4e-06
Hit Clone Code (BAC ID) F16L1
Hit Gene Code At1g22210 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Insertion Classification CDSi
Confirmation Status failed


Last Updated on 10.06.2021 13:37